Gene omics information

Query gene ID Os01g0827300
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os01g0827300AK071929.1-Laccase precursor (EC 1.10.3.2)7e-5At2g30210LAC3 (laccase 3)S.X.H.G.
0.8395.8Os05g0245300AB091471.1-Protein of unknown function DUF588 family protein7e+0Atcg00790-S.X.H.G.
0.7793.1Os06g0274800NM_185795.1-Peroxidase 11 precursor (EC 1.11.1.7) (AtperoxP11) (ATP23a/ATP23b)5e-4At1g68850peroxidase, putativeS.X.H.G.
0.7793.1Os07g0599700AK065663.1-Surface protein PspC6e+0At5g09480hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.6787.2Os07g0599900CF291190-Conserved hypothetical protein1e-1At5g09530hydroxyproline-rich glycoprotein family proteinS.X.H.G.
0.6787.2Os08g0478000AK059493.1-Conserved hypothetical protein4e-1At2g4051040S ribosomal protein S26 (RPS26A)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
23.899.4GSM159179Root, 7-day-old Seedling, biological rep 3GSE6893Expression data for reproductive development in rice
22.499.3GSM262002IAC165, 4 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
19.299.0GSM159178Root, 7-day-old Seedling, biological rep 2GSE6893Expression data for reproductive development in rice
15.398.7GSM359924Pokkali root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
14.698.6GSM262003IAC165, 4 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
14.198.5GSM359922Pokkali root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
14.098.5GSM159177Root, 7-day-old Seedling, biological rep 1GSE6893Expression data for reproductive development in rice
12.098.3GSM359911IR29 root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
11.398.2GSM262011Nipponbare, 2 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.598.1GSM262010Nipponbare, 2 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.412e-49198Os12g0108000AK109523.1-Laccase precursor (EC 1.10.3.2)1e-6At5g05390LAC12 (laccase 12)C.G.S.X.
0.333e-39165Os03g02979009631.m01839-Multicopper oxidase, type 1 domain containingprotein8e-8At5g05390LAC12 (laccase 12)C.G.S.X.
0.182e-1275Os05g04583009633.m03560-Laccase (EC 1.10.3.2)2e-1At5g05390LAC12 (laccase 12)C.G.S.X.
0.143e-30135Os01g0842500AK066513.1-Laccase (EC 1.10.3.2)2e-5At2g38080IRX12 (IRREGULAR XYLEM 12)C.G.S.X.
0.111e-20103Os12g02598009640.m01550-Multicopper oxidase, type 1 domain containingprotein2e-1At3g09220LAC7 (laccase 7)C.G.S.X.
0.096e-1687Os05g0458600AK068047.1-Laccase (EC 1.10.3.2)2e-8At5g60020LAC17 (laccase 17)C.G.S.X.
0.084e-1171Os01g0842400AK068901.1-Laccase (EC 1.10.3.2)7e-5At2g38080IRX12 (IRREGULAR XYLEM 12)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.097e-550Arabidopsis thalianaAt2g30210817571LAC3 (laccase 3)putative laccase, a member of laccase family of genes (17 members in Arabidopsis).---C.G.S.X.
0.111e-346Glycine maxGma.8441.1.S1_atAY113187.2diphenol oxidase laccase-1e-18At5g05390LAC12 (laccase 12)C.G.S.X.
0.198e-40165Hordeum vulgareContig15387_atContig15387--3e-2At2g40370LAC5 (laccase 5)C.G.S.X.
0.064e-448Populus trichocarpaPtpAffx.2130.1.A1_atCV228763laccase 90b /// laccase 90d-9e-6At2g40370LAC5 (laccase 5)C.G.S.X.
0.314e-142506Triticum aestivumTa.1643.1.S1_atCA606529--2e+0At3g05936unknown proteinC.G.S.X.
0.031e-344Vitis vinifera1612157_atCF213489hypothetical protein LOC100262045-1e-9At5g05390LAC12 (laccase 12)C.G.S.X.
0.325e-155547Zea maysZm.17315.1.A1_atCK369379L-ascorbate oxidase-9e-2At1g69840band 7 family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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