CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0818200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.56 76.3 Os01g0818200 AK103555.1 - TPR-like domain containing protein 2e+0 At1g18050 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein S.X. H.G.
0.57 77.0 Os08g0197100 AK110883.1 - Cyclin-like F-box domain containing protein 6e-2 At5g50760 auxin-responsive family protein S.X. H.G.
0.53 71.3 Os06g0268500 9634.m01581 - - 2e+0 At3g49200 unknown protein S.X. H.G.
0.35 41.7 Os12g0164500 9640.m00599 - - 2e+1 At5g24105 AGP41 (ARABINOGALACTAN-PROTEIN 41) S.X. H.G.
0.30 32.7 Os09g0384900 AK064530.1 - Conserved hypothetical protein 3e-3 At1g14860 atnudt18 (Arabidopsis thaliana Nudix hydrolase homolog 18) S.X. H.G.
0.16 11.3 Os03g0621800 9631.m04081 - - 2e+0 At2g04430 atnudt5 (Arabidopsis thaliana Nudix hydrolase homolog 5) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
32.5 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
30.5 99.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.9 99.6 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.7 99.6 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.7 99.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.4 99.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.2 99.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.2 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.1 99.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.4 99.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 0 870 Os01g0818100 NM_191091.1 - - 2e-8 At5g01990 auxin efflux carrier family protein C.G. S.X.
0.02 5e-3 44 Os10g0483900 NM_197061.1 - Conserved hypothetical protein 2e+0 At3g55880 unknown protein C.G. S.X.
0.02 2e-2 42 Os08g0319900 AK108030.1 - Putative cyclase family protein 1e-14 At4g35220 cyclase family protein C.G. S.X.
0.02 7e-2 40 Os03g0126600 CB641995 - Conserved hypothetical protein 2e-1 At1g60670 - C.G. S.X.
0.01 5e-4 48 Os04g0221300 AK063532.1 - Protein prenyltransferase domain containingprotein 6e-2 At3g62890 binding C.G. S.X.
0.01 5e-3 44 Os06g0181500 AK100878.1 - Plasma membrane H+-ATPase (EC 3.6.1.3) 2e-6 At1g80660 AHA9 C.G. S.X.
0.01 3e-2 42 Os01g0374200 9629.m02643 - TPR-like domain containing protein 5e-3 At1g19720 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.01 3e-2 42 Os01g0912900 AK119446.1 - Protein prenyltransferase domain containingprotein 3e-2 At5g16400 ATF2 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At1g18050 838385 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein F:RNA binding;P:RNA processing;C:cellular_component unknown;MPOF - - - C.G. S.X.
0.02 1e-2 42 Glycine max Gma.8702.1.S1_s_at BU761055 - - 3e-1 At2g03310 unknown protein C.G. S.X.
0.02 3e-1 36 Hordeum vulgare Contig9879_at Contig9879 - - 4e-1 At1g64000 WRKY56 C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.104425.1.A1_at AJ772350 hypothetical protein - 3e-51 At2g40840 DPE2 (DISPROPORTIONATING ENZYME 2) C.G. S.X.
0.15 2e-13 77 Triticum aestivum TaAffx.58101.1.S1_at CA622434 - - 4e+0 At3g29000 calcium-binding EF hand family protein C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1622782_at CF605860 hypothetical protein LOC100243698 - 9e-26 At4g37260 MYB73 (MYB DOMAIN PROTEIN 73) C.G. S.X.
0.02 6e-2 38 Zea mays Zm.15216.1.A1_at BM335032 protein transport protein Sec61 beta subunit - 2e-2 At5g60460 sec61beta family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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