CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0818100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 77.0 Os01g0818100 NM_191091.1 - - 2e-8 At5g01990 auxin efflux carrier family protein S.X. H.G.
0.61 81.2 Os10g0572000 NM_197842.1 - GTP-binding protein, HSR1-related domaincontaining protein 6e-1 At5g64460 - S.X. H.G.
0.46 60.9 Os02g0456000 AK119496.1 - - 4e-6 At4g01400 - S.X. H.G.
0.37 45.0 Os09g0546400 AK072378.1 - - 1e+0 At2g41225 unknown protein S.X. H.G.
0.33 38.8 Os02g0159400 AK109550.1 - Hypothetical protein 8e-2 At3g46666 unknown protein S.X. H.G.
0.32 36.3 Os12g0626000 AK109499.1 - Hypothetical protein 9e-3 At3g13570 SCL30a S.X. H.G.
0.24 22.4 Os11g0106800 9639.m00055 - Hypothetical protein 3e-1 At3g06780 glycine-rich protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
32.2 99.7 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.7 99.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.1 99.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.2 99.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.4 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.3 99.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.2 99.5 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.8 99.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 5e-66 254 Os05g0481900 AK119626.1 - Auxin Efflux Carrier family protein 1e-9 At5g01990 auxin efflux carrier family protein C.G. S.X.
0.24 0 870 Os01g0818200 AK103555.1 - TPR-like domain containing protein 2e+0 At1g18050 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein C.G. S.X.
0.01 2e-1 40 Os04g0308100 AK100568.1 - The start codon is not identified. 2e-3 At1g34315 unknown protein C.G. S.X.
0.01 2e-1 40 Os07g0470100 9635.m02790 - - 4e+0 At1g68238 unknown protein C.G. S.X.
0.01 6e-1 38 Os06g0109400 AK101114.1 - - 2e-5 At3g01610 CDC48C C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 2e-8 61 Arabidopsis thaliana At5g01990 830729 auxin efflux carrier family protein F:auxin:hydrogen symporter activity;P:auxin polar transport;C:integral to membrane;FPOB - - - C.G. S.X.
0.03 5e-4 48 Glycine max GmaAffx.25445.1.S1_at AW156230 - - 9e-10 At5g01990 auxin efflux carrier family protein C.G. S.X.
0.43 0 680 Hordeum vulgare Contig5580_s_at Contig5580 - - 7e-11 At5g01990 auxin efflux carrier family protein C.G. S.X.
0.09 5e-10 67 Populus trichocarpa PtpAffx.219829.1.S1_at pmrna35973 hypothetical protein - 1e-57 At5g01990 auxin efflux carrier family protein C.G. S.X.
0.35 1e-111 404 Triticum aestivum Ta.12796.1.S1_s_at BE430492 - - 8e-16 At5g01990 auxin efflux carrier family protein C.G. S.X.
0.01 1e+0 34 Vitis vinifera 1613027_at CB982624 hypothetical protein LOC100264294 - 5e+0 At2g36360 kelch repeat-containing protein C.G. S.X.
0.01 1e-1 38 Zea mays ZmAffx.1044.1.A1_at AI881789 - - 3e-1 At5g66800 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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