CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0817400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os01g0817400 NM_191084.1 - Conserved hypothetical protein 6e+0 At5g37060 ATCHX24 S.X. H.G.
0.91 98.9 Os06g0187200 AK106963.1 - Nucleotide sugar epimerase-like protein(UDP-D-glucuronate 4- epimerase) (EC 5.1.3.6) 1e-14 At1g02000 GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2) S.X. H.G.
0.60 79.7 Os12g0640500 AK070701.1 - Na+/H+ antiporter-like protein 2e+0 At5g57290 60S acidic ribosomal protein P3 (RPP3B) S.X. H.G.
0.55 73.7 Os11g0195700 AK111008.1 - Hypothetical protein 7e-3 At1g25425 CLE43 (CLAVATA3/ESR-RELATED 43) S.X. H.G.
0.23 21.2 Os07g0191600 AK102563.1 - Conserved hypothetical protein 2e+0 At1g69890 - S.X. H.G.
0.09 4.9 Os08g0214266 9636.m01112 - - 3e-1 At5g11680 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
67.2 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
32.0 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.9 99.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.9 99.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.1 99.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.4 99.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.3 99.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.2 99.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.6 99.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.7 99.2 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.65 0 1298 Os05g0485000 AK106318.1 - Conserved hypothetical protein 2e+0 At1g03600 photosystem II family protein C.G. S.X.
0.14 9e-22 107 Os05g0276100 AK069092.1 - Na+/H+ exchangeing protein-like 2e-5 At4g23700 ATCHX17 (CATION/H+ EXCHANGER 17) C.G. S.X.
0.12 8e-13 77 Os05g0113300 AK106443.1 - Conserved hypothetical protein 4e-4 At3g53720 ATCHX20 (CATION/H+ EXCHANGER 20) C.G. S.X.
0.05 2e-7 59 Os12g0121600 AK072782.1 - Conserved hypothetical protein 1e+0 At5g03380 heavy-metal-associated domain-containing protein C.G. S.X.
0.05 3e-6 56 Os05g0473400 AK100933.1 - Hypothetical protein 2e-3 At1g67840 CSK (CHLOROPLAST SENSOR KINASE) C.G. S.X.
0.03 2e-7 59 Os08g0117800 AK100696.1 - Conserved hypothetical protein 1e+0 At5g19810 proline-rich extensin-like family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 6e+0 34 Arabidopsis thaliana At5g37060 833677 ATCHX24 member of Putative Na+/H+ antiporter family - - - C.G. S.X.
0.02 1e-1 40 Glycine max PsAffx.C2000023_at PsAffx.C2000023 - - 2e-3 At3g02540 RAD23-3 (PUTATIVE DNA REPAIR PROTEIN RAD23-3) C.G. S.X.
0.02 2e-1 38 Hordeum vulgare AF474072_CDS-4_at AF474072_CDS-4 - - 1e+0 At5g05810 ATL43 C.G. S.X.
0.01 5e-1 38 Populus trichocarpa PtpAffx.206136.1.S1_at pmrna12170 cation proton exchanger - 1e-9 At3g53720 ATCHX20 (CATION/H+ EXCHANGER 20) C.G. S.X.
0.11 7e-49 196 Triticum aestivum TaAffx.119925.1.A1_at BJ251519 - - 4e+0 At1g68725 AGP19 (ARABINOGALACTAN-PROTEIN 19) C.G. S.X.
0.01 2e+0 34 Vitis vinifera 1622474_at CF373640 - - 3e+0 At1g54445 - C.G. S.X.
0.02 2e-1 38 Zea mays Zm.1004.1.S1_at BE511241 - - 2e+0 At5g37200 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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