CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0811900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0811900 NM_191050.1 - - 8e+0 At5g01870 lipid transfer protein, putative S.X. H.G.
0.53 71.3 Os02g0542600 AK110826.1 - Hypothetical protein 1e-2 At5g44820 unknown protein S.X. H.G.
0.44 58.1 Os08g0199500 9636.m00954 - - 3e+0 At2g32788 - S.X. H.G.
0.36 44.0 Os07g0584666 NM_186992.1 - - 5e+0 At3g32180 unknown protein S.X. H.G.
0.31 34.5 Os12g0534900 9640.m03377 - - 7e-1 At3g46200 aTNUDT9 (Arabidopsis thaliana Nudix hydrolase homolog 9) S.X. H.G.
0.29 31.1 Os02g0293650 9630.m01825 - - 9e+0 At5g67510 60S ribosomal protein L26 (RPL26B) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
125.7 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.2 99.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.0 99.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.3 99.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.7 99.2 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.4 99.1 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.8 99.1 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.9 99.0 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.7 99.0 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.6 98.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.27 2e-54 214 Os01g0797800 AK122155.1 - Hypothetical protein 3e-3 At1g08480 unknown protein C.G. S.X.
0.08 9e-26 119 Os02g0104500 AK120063.1 - DNA-binding protein DF1 3e-7 At1g76890 - C.G. S.X.
0.07 1e-3 46 Os08g0187400 9636.m00834 - - 3e-1 At5g18380 40S ribosomal protein S16 (RPS16C) C.G. S.X.
0.04 5e-9 63 Os05g0501800 9633.m03966 - - 3e-2 At5g38980 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e+0 32 Arabidopsis thaliana At5g01870 831705 lipid transfer protein, putative Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. - - - C.G. S.X.
0.02 7e-1 36 Glycine max PsAffx.CL2171Contig1_at PsAffx.CL2171Contig1 - - 1e+0 At5g54430 universal stress protein (USP) family protein C.G. S.X.
0.03 1e+0 34 Hordeum vulgare Contig12407_at Contig12407 - - 7e-1 At2g44130 kelch repeat-containing F-box family protein C.G. S.X.
0.02 7e-1 36 Populus trichocarpa PtpAffx.215951.1.S1_at pmrna30431 hypothetical protein - 1e+0 At2g26940 zinc finger (C2H2 type) family protein C.G. S.X.
0.03 4e-2 40 Triticum aestivum Ta.5002.2.S1_at CA712853 - - 1e+0 At3g15353 MT3 (METALLOTHIONEIN 3) C.G. S.X.
0.02 6e-1 34 Vitis vinifera 1615922_at CB918668 - - 7e-27 At3g58450 universal stress protein (USP) family protein C.G. S.X.
0.02 6e-2 38 Zea mays Zm.17712.1.S1_at CK370052 hypothetical protein LOC100275406 - 8e-20 At5g19855 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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