CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0802400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.78 93.4 Os01g0802400 9640.m01501 - Conserved hypothetical protein 8e-1 At5g26110 ATP binding / catalytic/ protein kinase S.X. H.G.
0.71 89.6 Os11g0648200 9639.m03950 - - 2e+0 At4g11870 unknown protein S.X. H.G.
0.71 89.6 Os12g0165400 9640.m00608 - Hypothetical protein 1e+0 At1g53480 unknown protein S.X. H.G.
0.67 87.2 Os11g0210800 9639.m00995 - - 3e-1 At1g23600 unknown protein S.X. H.G.
0.67 87.2 Os12g0168600 9640.m00635 - - 3e+0 At4g02890 UBQ14 S.X. H.G.
0.67 87.2 Os04g0347500 9632.m02642 - - 9e-2 At3g21120 F-box family protein S.X. H.G.
0.59 78.0 Os02g0126200 9630.m00240 - - 6e-1 At1g54095 unknown protein S.X. H.G.
0.57 77.0 Os07g0133200 9635.m00340 - - 9e-1 At1g33860 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
242.3 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
26.8 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.8 98.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.3 98.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.5 98.5 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.5 98.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.4 98.3 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.2 98.3 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.5 98.1 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.2 98.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e-1 36 Os07g0121200 NM_194202.1 - Protein kinase domain containing protein 9e-1 At5g47870 unknown protein C.G. S.X.
0.01 2e+0 34 Os03g0742800 AK102769.1 - COPII subunit Sec23 (Fragment) 3e-8 At5g43670 transport protein, putative C.G. S.X.
0.01 6e+0 32 Os05g0402800 BI118799 - ATPase, E1-E2 type family protein 1e-11 At5g23630 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase familiy protein C.G. S.X.
0.00 6e+0 32 Os05g0295300 AK059261.1 - Acetyl-coenzyme A carboxylase (EC 6.4.1.2) 2e+0 At3g24280 SMAP2 (small acidic protein 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-1 34 Arabidopsis thaliana At5g26110 832680 ATP binding / catalytic/ protein kinase F:protein kinase activity, catalytic activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;BOMAFP - - - C.G. S.X.
0.04 5e+0 32 Glycine max GmaAffx.63850.1.S1_at BI315570 - - 1e-8 At2g41820 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.03 2e+0 32 Hordeum vulgare HVSMEi0013O11r2_at HVSMEi0013O11r2 - - 2e-2 At4g30460 glycine-rich protein C.G. S.X.
0.04 7e-2 38 Populus trichocarpa PtpAffx.77819.1.A1_at CK092607 - - 2e-1 At3g58130 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase-related C.G. S.X.
0.04 2e-1 36 Triticum aestivum Ta.6446.2.S1_at BJ305931 - - 3e-1 At1g07950 surfeit locus protein 5 family protein / SURF5 family protein C.G. S.X.
0.04 1e+0 32 Vitis vinifera 1613889_at CD801455 hypothetical protein LOC100248935 - 3e+0 At5g66090 unknown protein C.G. S.X.
0.03 6e+0 30 Zea mays Zm.3757.1.A1_at CB351276 ferredoxin-3 - 1e+0 At4g00670 DNA binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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