CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0775500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.74 91.4 Os01g0775500 AK100936.1 - Jacalin-related lectin domain containing protein 2e-4 At1g73040 jacalin lectin family protein S.X. H.G.
0.68 87.5 Os09g0460300 AK071569.1 - Esterase/lipase/thioesterase domain containingprotein 1e-2 At5g06570 hydrolase S.X. H.G.
0.67 87.2 Os06g0108900 AK101029.1 - Homeobox domain containing protein 1e-12 At5g41410 BEL1 (BELL 1) S.X. H.G.
0.60 79.7 Os07g0464200 9635.m02713 - O-methyltransferase, family 2 domain containingprotein 8e+0 At1g26800 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.58 77.0 Os01g0574700 NM_193609.1 - - 3e-3 At5g01410 RSR4 (REDUCED SUGAR RESPONSE 4) S.X. H.G.
0.53 71.3 Os03g0161900 AY344489.1 - Heat shock transcription factor 21 (Fragment) 8e-7 At5g03720 AT-HSFA3 S.X. H.G.
0.49 64.4 Os07g0489300 AK060228.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 3e+0 At2g15320 leucine-rich repeat family protein S.X. H.G.
0.48 63.7 Os05g0232200 AK071646.1 - Conserved hypothetical protein 3e+0 At5g15190 unknown protein S.X. H.G.
0.44 58.1 Os10g0190500 AK070455.1 - Protein of unknown function DUF594 family protein 3e-1 At5g06250 transcription factor S.X. H.G.
0.41 52.4 Os11g0107400 AK065945.1 - Nodulin-like domain containing protein 1e-9 At5g45275 - S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
23.6 99.4 GSM421692 XOO, 4 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
22.0 99.3 GSM421688 XOO, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
19.1 99.0 GSM174885 B FR13 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
18.8 99.0 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.3 98.8 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.4 98.6 GSM421668 XOC, 2 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
13.8 98.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.0 98.2 GSM421672 XOC, 4 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.8 98.0 GSM421712 MOCK, 4 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.8 98.0 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 2e-8 61 Os05g0508400 AK073221.1 - Jacalin-related lectin domain containing protein 3e-4 At1g19715 jacalin lectin family protein C.G. S.X.
0.02 1e+0 36 Os06g0169900 CB096301 - Hypothetical protein 5e-1 At5g14320 30S ribosomal protein S13, chloroplast (CS13) C.G. S.X.
0.01 3e-1 38 Os02g0301800 AK067818.1 - Disease resistance protein family protein 5e-1 At5g20310 - C.G. S.X.
0.01 1e+0 36 Os08g0560000 AK107230.1 - 2OG-Fe(II) oxygenase domain containing protein 4e-6 At2g36690 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 2e-4 48 Arabidopsis thaliana At1g73040 843635 jacalin lectin family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBMO - - - C.G. S.X.
0.02 3e+0 34 Glycine max HgAffx.8305.1.S1_at CB380196 - - 1e+0 At1g47265 unknown protein C.G. S.X.
0.03 2e+1 30 Hordeum vulgare Contig14797_at Contig14797 - - 9e+0 At5g05610 AL1 (ALFIN-LIKE 1) C.G. S.X.
0.04 5e-2 40 Populus trichocarpa PtpAffx.205797.1.S1_at pmrna11460 hypothetical protein - 3e+0 At5g46730 glycine-rich protein C.G. S.X.
0.02 3e+0 34 Triticum aestivum TaAffx.4638.1.S1_at CA735893 - - 3e+0 At4g28660 PSB28 (PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN) C.G. S.X.
0.02 7e-1 34 Vitis vinifera 1612907_at CB003768 - - 7e-27 At2g04530 CPZ C.G. S.X.
0.02 4e+0 32 Zea mays ZmAffx.992.1.A1_at AI855055 - - 8e-1 At2g02570 nucleic acid binding C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage