CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0775100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0775100 CB630660 - Plus-3 domain containing protein 5e-1 At4g32930 unknown protein S.X. H.G.
0.80 94.6 Os02g0680700 CR281424 - Myb, DNA-binding domain containing protein 8e+0 Atmg00300 - S.X. H.G.
0.77 93.1 Os02g0771100 AB040053.1 - COP1 regulatory protein (Constitutivephotomorphogenesis protein 1) 3e-29 At2g32950 COP1 (CONSTITUTIVE PHOTOMORPHOGENIC 1) S.X. H.G.
0.67 87.2 Os04g0662700 AK069126.1 - GTP cyclohydrolase I (EC 3.5.4.16) 3e-1 At3g07270 GTP cyclohydrolase I S.X. H.G.
0.60 79.7 Os03g0572900 AK102204.1 - Multi antimicrobial extrusion protein MatE familyprotein 8e-20 At3g21690 MATE efflux family protein S.X. H.G.
0.50 68.0 Os01g0725800 AK063441.1 - Protein kinase family protein 3e-19 At2g47110 UBQ6 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
8.1 97.7 GSM421706 XOO, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.6 97.5 GSM173091 Rice OsSRT1 RNAi transgenic line LM1 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
7.5 97.5 GSM421686 XOC, 96 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.3 97.5 GSM421722 MOCK, 24 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
7.1 97.4 GSM174885 B FR13 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
6.9 97.3 GSM421681 XOC, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.9 97.3 GSM421719 MOCK, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.7 97.3 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
6.6 97.3 GSM195225 Shoot GSE7951 Genome-wide gene expression profiling of rice stigma
6.4 97.2 GSM421720 MOCK, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 3e-4 50 Os08g0535800 AK067906.1 - No apical meristem (NAM) protein domain containingprotein 5e-2 At5g62500 ATEB1B (END BINDING PROTEIN 1B) C.G. S.X.
0.01 3e-4 50 Os08g0535900 AK107757.1 - Conserved hypothetical protein 3e-1 At5g47700 60S acidic ribosomal protein P1 (RPP1C) C.G. S.X.
0.01 3e-4 50 Os12g0165700 CB663072 - Transcription factors TFIIS, elongin A, CRSP70,conserved domain containing protein 2e-1 At5g09850 transcription elongation factor-related C.G. S.X.
0.01 4e-3 46 Os02g0640700 AK106833.1 - UAS domain containing protein 2e-1 At5g15210 ATHB30 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 30) C.G. S.X.
0.01 4e-3 46 Os04g0421900 AK066958.1 - Conserved hypothetical protein 6e-22 At1g76850 SEC5A (EXOCYST COMPLEX COMPONENT SEC5) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 5e-1 38 Arabidopsis thaliana At4g32930 829430 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPO - - - C.G. S.X.
0.01 2e-1 40 Glycine max GmaAffx.60067.1.S1_at BG651457 - - 1e-3 At2g41990 unknown protein C.G. S.X.
0.10 8e-54 212 Hordeum vulgare Contig11997_at Contig11997 - - 1e+0 At4g19390 - C.G. S.X.
0.01 7e-1 38 Populus trichocarpa PtpAffx.43837.1.A1_s_at CV256587 hypothetical protein - 3e-6 At4g24026 unknown protein C.G. S.X.
0.12 1e-69 266 Triticum aestivum Ta.4794.1.A1_at BJ275261 - - 7e+0 At5g51260 acid phosphatase, putative C.G. S.X.
0.01 2e+0 34 Vitis vinifera 1621283_at AF257777.1 H+-pyrophosphatase - 1e-93 At1g15690 AVP1 C.G. S.X.
0.22 3e-62 240 Zea mays Zm.4350.1.A1_at AW091239 - - 1e+0 At5g49334 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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