CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0771000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0771000 AK069298.1 - Protein of unknown function DUF567 family protein 2e+0 At3g21260 glycolipid transfer protein-related S.X. H.G.
0.01 0.5 Os01g0655500 AK120660.1 - Protein kinase domain containing protein 1e-10 At5g53450 ORG1 (OBP3-responsive gene 1) S.X. H.G.
0.01 0.5 Os04g0474800 AK100820.1 - Glycoside hydrolase, family 1 protein 3e-3 At5g42260 BGLU12 (BETA GLUCOSIDASE 12) S.X. H.G.
0.00 0.1 Os07g0503300 AK105785.1 - - 4e-3 At4g15260 UDP-glucoronosyl/UDP-glucosyl transferase family protein S.X. H.G.
0.00 0.1 Os03g0156700 AK108804.1 - High-affinity nickel-transporter family protein 3e-6 At4g35080 high-affinity nickel-transport family protein S.X. H.G.
0.00 0.1 Os05g0497600 C99502 - Ribosomal L11 methyltransferase family protein 2e+0 At5g66110 metal ion binding S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
47.4 99.9 GSM431935 Shoot- -Fe+P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
35.1 99.8 GSM302920 root_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
31.0 99.7 GSM431936 Shoot- -Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
13.6 98.5 GSM173091 Rice OsSRT1 RNAi transgenic line LM1 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
13.1 98.4 GSM116401 Seedling_BAP treated_rep1 GSE5167 Rice seedling hormone treatment
11.1 98.2 GSM195226 Root GSE7951 Genome-wide gene expression profiling of rice stigma
10.1 98.0 GSM116402 Seedling_BAP treated_rep2 GSE5167 Rice seedling hormone treatment
9.7 98.0 GSM421695 XOO, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
9.7 98.0 GSM116399 Seedling_IAA treated_rep1 GSE5167 Rice seedling hormone treatment
8.5 97.7 GSM116398 Seedling_Control_rep2 GSE5167 Rice seedling hormone treatment
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 2e-23 111 Os05g0510100 BI810491 - Protein of unknown function DUF567 family protein 2e-1 At5g52360 ADF10 (ACTIN DEPOLYMERIZING FACTOR 10) C.G. S.X.
0.03 2e-2 42 Os02g0533700 CB670805 - Conserved hypothetical protein 5e+0 At5g25010 unknown protein C.G. S.X.
0.02 1e-3 46 Os07g0138500 9635.m00390 - - 1e-2 At2g17420 NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A) C.G. S.X.
0.02 2e-2 42 Os02g0566400 AK101019.1 - Conserved hypothetical protein 4e-3 At4g29460 phospholipase A2 gamma, secretory low molecular weight C.G. S.X.
0.02 2e-2 42 Os03g0343400 AK105611.1 - Photolyase/blue-light receptor (Photolyase/bluelight photoreceptor PHR2) 4e-6 At2g47590 PHR2 (photolyase/blue-light receptor 2) C.G. S.X.
0.02 2e-2 42 Os12g0552200 AK106375.1 - Patatin-like protein 3 3e-3 At4g36780 transcription regulator C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At3g21260 821680 glycolipid transfer protein-related F:glycolipid transporter activity, glycolipid binding;P:glycolipid transport;C:cytoplasm;MFPO - - - C.G. S.X.
0.05 5e-2 40 Glycine max HgAffx.12256.1.S1_at CB375726 - - 2e-1 At3g43520 unknown protein C.G. S.X.
0.55 1e-117 422 Hordeum vulgare Contig14095_at Contig14095 - - 1e-1 At5g22340 unknown protein C.G. S.X.
0.03 5e-2 40 Populus trichocarpa PtpAffx.215480.1.S1_at pmrna29698 hypothetical protein - 1e+0 At2g43450 unknown protein C.G. S.X.
0.54 6e-118 424 Triticum aestivum Ta.7992.1.S1_at BQ161093 - - 2e+0 At1g52905 unknown protein C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1607104_at BQ793780 hypothetical protein LOC100267573 - 3e-19 At1g34020 transporter-related C.G. S.X.
0.03 1e-2 40 Zea mays Zm.3682.1.A1_at BG874096 - - 1e+0 At3g06590 transcription factor C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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