Gene omics information

Query gene ID	Os01g0758800
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.9	Os01g0758800	AU082216	-	Conserved hypothetical protein	1e+0	At3g26420	ATRZ-1A	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.80	94.6	Os07g0226700	9635.m01218	-	-	1e+0	At3g15750	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.73	91.1	Os01g0843250	9629.m06177	-	-	1e+0	At1g01780	LIM domain-containing protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.67	87.2	Os05g0558750	9633.m04529	-	-	8e+0	At3g19790	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.50	68.0	Os02g0255400	NM_196472.1	-	RNA-directed DNA polymerase (Reversetranscriptase) domain containing protein	1e-3	At2g39480	PGP6 (P-GLYCOPROTEIN 6)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.33	38.8	Os07g0642000	NM_188821.1	-	-	9e-4	At1g18680	HNH endonuclease domain-containing protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
62.5	99.9	GSM422672	Drought	GSE16865	Heterologous microarrays for the study of drought stress in Musa
26.6	99.5	GSM377081	Genomic DNA - 45 day old leaf sample - mutant g7534	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.0	99.5	GSM377070	Genomic DNA - 45 day old leaf sample - mutant d1	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.2	99.5	GSM377080	Genomic DNA - 45 day old leaf sample - mutant g6728	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.9	99.5	GSM377084	Genomic DNA - 45 day old leaf sample - mutant f1856	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.3	99.4	GSM377076	Genomic DNA - 45 day old leaf sample - mutant g6485	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.0	99.3	GSM377085	Genomic DNA - 45 day old leaf sample - mutant f2045	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.6	99.3	GSM377077	Genomic DNA - 45 day old leaf sample - mutant g6489	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.8	99.2	GSM377078	Genomic DNA - 45 day old leaf sample - mutant g6603	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.5	99.2	GSM377086	Genomic DNA - 45 day old leaf sample - IR64 wtcheck	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.05	4e-1	36	Os01g0138700	9629.m00379	-	-	2e+0	At1g56630	triacylglycerol lipase	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.03	2e-1	38	Os03g0648600	9631.m04314	-	-	3e-1	At5g21170	5'-AMP-activated protein kinase beta-2 subunit, putative	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.03	4e-1	36	Os08g0208200	AK062824.1	-	Peptidase aspartic family protein	1e+0	At1g29950	transcription factor/ transcription regulator	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	4e-2	40	Os09g0255400	AK071383.1	-	Indole-3-glycerol phosphate synthase, chloroplastprecursor (EC 4.1.1.48) (IGPS)	7e-1	At2g04400	indole-3-glycerol phosphate synthase (IGPS)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	4e-1	36	Os05g0582600	AK109766.1	-	Peptidase S10, serine carboxypeptidase familyprotein	4e+0	At4g08230	glycine-rich protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	4e-1	36	Os09g0432700	AK109890.1	-	Conserved hypothetical protein	8e-1	At2g27580	zinc finger (AN1-like) family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	4e-1	36	Os02g0727100	AK069154.1	-	Amino acid/polyamine transporter II family protein	2e-5	At3g30390	amino acid transporter family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	4e-1	36	Os03g0840500	9631.m06162	-	Hypothetical protein	3e-1	At5g63000	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	1e+0	34	Arabidopsis thaliana	At3g26420	822246	ATRZ-1A	Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.03	2e+0	34	Glycine max	PsAffx.psZO001iH12r_s_at	PsAffx.psZO001iH12r	-	-	4e+0	At4g19540	INDL (IND1(IRON-SULFUR PROTEIN REQUIRED FOR NADH DEHYDROGENASE)-LIKE)	C.G.	S.X.	Please select
0.04	2e-1	36	Hordeum vulgare	HVSMEf0019M19r2_s_at	HVSMEf0019M19r2	-	-	1e+1	At5g52270	vesicle transport protein-related	C.G.	S.X.	Please select
0.03	2e+0	34	Populus trichocarpa	PtpAffx.204063.1.S1_at	pmrna8012	hypothetical protein	-	2e-1	At3g62180	invertase/pectin methylesterase inhibitor family protein	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.04	1e+0	34	Triticum aestivum	TaAffx.55786.1.S1_at	CA661305	-	-	6e-1	At1g13607	-	C.G.	S.X.	Please select
0.03	2e+0	32	Vitis vinifera	1613388_at	CF568873	-	-	1e-9	At4g25370	Clp amino terminal domain-containing protein	C.G.	S.X.	Please select
0.03	6e-1	34	Zea mays	Zm.15448.1.S1_at	CD448349	plastidic phosphate translocator-like protein1	-	4e-24	At4g32390	phosphate translocator-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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