CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0756600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os01g0756600 AK102373.1 - Protein of unknown function DUF642 family protein 3e-16 At2g34510 - S.X. H.G.
0.67 87.2 Os09g0363900 AK072899.1 - Mandelonitrile lyase-like protein 1e-3 At1g72970 HTH (HOTHEAD) S.X. H.G.
0.61 81.2 Os07g0205500 AK103449.1 - Protein of unknown function DUF239 domaincontaining protein 8e-23 At3g13510 unknown protein S.X. H.G.
0.57 77.0 Os01g0531400 AK102373.1 - Protein of unknown function DUF642 family protein 3e-16 At2g34510 - S.X. H.G.
0.53 71.3 Os04g0517000 AK101663.1 - Conserved hypothetical protein 3e-2 At1g11700 unknown protein S.X. H.G.
0.30 32.7 Os05g0406800 AK062566.1 - Leucine-rich repeat, plant specific containingprotein 2e-2 At3g53235 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.6 98.4 GSM429984 Rice wild-type panicle rep2 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
12.3 98.3 GSM99870 TCHW P13_agami control, biological rep1 GSE4438 Expression data from rice under salinity stress
11.9 98.3 GSM409427 Nipponbare_young panicle 2cm, biological rep3 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
11.5 98.2 GSM409432 9311_young panicle 2cm, biological rep3 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
11.0 98.2 GSM159201 Inflorescence (P5, 15 - 22 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
10.5 98.1 GSM409421 Nipponbare_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
10.4 98.1 GSM409428 Nipponbare_young panicle 2cm, biological rep4 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
9.6 97.9 GSM409429 Nipponbare_young panicle 2cm, biological rep5 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
9.6 97.9 GSM99881 TCHW P23_ir29 salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
9.4 97.9 GSM99874 TCHW P17_agami salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.96 0 2906 Os01g0531400 AK102373.1 - Protein of unknown function DUF642 family protein 3e-16 At2g34510 - C.G. S.X.
0.02 4e-1 38 Os08g0158600 NM_189050.1 - Conserved hypothetical protein 3e+0 At1g31330 PSAF (photosystem I subunit F) C.G. S.X.
0.02 2e+0 36 Os08g0342000 9636.m02487 - - 6e-1 At5g62770 unknown protein C.G. S.X.
0.01 4e-1 38 Os08g0162400 AK063453.1 - - 3e-4 At2g23780 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 2e+0 36 Os03g0278700 9631.m01671 - Zn-finger-like, PHD finger domain containingprotein 2e+0 At1g08310 esterase/lipase/thioesterase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 3e-16 87 Arabidopsis thaliana At2g34510 818014 - F:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PB - - - C.G. S.X.
0.07 8e-8 59 Glycine max GmaAffx.63408.1.S1_at AW099756 - - 5e-31 At1g29980 - C.G. S.X.
0.64 5e-158 557 Hordeum vulgare Contig5845_at Contig5845 - - 3e-3 At2g34510 - C.G. S.X.
0.11 1e-6 56 Populus trichocarpa Ptp.5631.1.S1_at CA933757 hypothetical protein - 4e-8 At1g29980 - C.G. S.X.
0.56 3e-139 496 Triticum aestivum Ta.2840.1.S1_at BJ311413 - - 4e+0 At1g58007 unknown protein C.G. S.X.
0.04 2e-5 50 Vitis vinifera 1613254_at CF568816 - - 7e-8 At1g29980 - C.G. S.X.
0.58 0 650 Zea mays Zm.301.2.A1_x_at CO521836 hypothetical protein LOC100276367 - 4e-9 At2g34510 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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