CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0743600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os01g0743600 CB629272 - Peptidase S16, lon N-terminal domain containingprotein 2e+0 At4g02620 vacuolar ATPase subunit F family protein S.X. H.G.
0.73 91.1 Os01g0977400 AK101308.1 - TPR-like domain containing protein 2e-2 At4g18570 proline-rich family protein S.X. H.G.
0.55 73.7 Os02g0232100 AK100854.1 - Zn-finger, RING domain containing protein 6e-29 At1g53490 DNA binding S.X. H.G.
0.33 38.8 Os02g0148600 AK059287.1 - Conserved hypothetical protein 5e-4 At1g33250 fringe-related protein S.X. H.G.
0.14 9.3 Os02g0280200 9630.m05910 - Beta-glucanase family protein 2e-3 At4g28850 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative S.X. H.G.
0.06 3.0 Os12g0624100 AK107389.1 - Hypothetical protein 1e-2 At5g44450 methyltransferase S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
87.6 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
24.6 99.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.1 99.3 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.4 99.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.4 99.1 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.7 99.1 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.3 99.0 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.9 99.0 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.6 99.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.6 99.0 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.19 2e-25 119 Os05g0521500 AK066030.1 - Peptidase S16, lon N-terminal domain containingprotein 3e-1 At2g25740 ATP-dependent protease La (LON) domain-containing protein C.G. S.X.
0.13 4e-59 230 Os06g0176600 AK062794.1 - - 2e+0 At1g13670 unknown protein C.G. S.X.
0.05 4e-51 204 Os01g0743500 AY444338.1 - NADP-dependent malic enzyme (EC 1.1.1.40)(NADP-ME) 3e-47 At5g11670 ATNADP-ME2 (NADP-malic enzyme 2) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At4g02620 828221 vacuolar ATPase subunit F family protein F:hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism;P:ATP synthesis coupled proton transport;C:plasma membrane, vacuole;MFOPA - - - C.G. S.X.
0.03 2e+0 34 Glycine max GmaAffx.42779.2.S1_s_at BU964750 PHD4 - 1e-42 At5g26210 AL4 (ALFIN-LIKE 4) C.G. S.X.
0.14 4e-21 101 Hordeum vulgare Contig19922_at Contig19922 - - 2e+1 At5g15460 MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2) C.G. S.X.
0.03 9e+0 32 Populus trichocarpa PtpAffx.79141.1.S1_at BU865561 - - 5e-1 At5g06510 NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10) C.G. S.X.
0.11 2e-21 103 Triticum aestivum Ta.8261.1.S1_a_at CD871745 - - 4e-1 At3g24450 copper-binding family protein C.G. S.X.
0.02 2e+0 32 Vitis vinifera 1614336_at CF211652 hypothetical protein LOC100242597 - 4e-1 At4g27657 unknown protein C.G. S.X.
0.11 1e-2 40 Zea mays Zm.1668.1.A1_at CF637028 hypothetical protein LOC100193513 - 2e-3 At2g25740 ATP-dependent protease La (LON) domain-containing protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage