Gene omics information

Query gene ID Os01g0740500
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.8094.6Os01g07405009629.m05236-Transferrin receptor-like dimerisation regiondomain containing protein2e-5At3g54720AMP1 (ALTERED MERISTEM PROGRAM 1)S.X.H.G.
0.6787.2Os07g0280200AK108656.1-AMP-dependent synthetase and ligase domaincontaining protein2e-2At5g633804-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinS.X.H.G.
0.6181.2Os12g0454800AY572461.1-Histidine kinase7e-3At5g10530lectin protein kinase, putativeS.X.H.G.
0.4762.3Os05g0593900AK058553.1-C13 endopeptidase NP1 precursor5e-2At3g20210DELTA-VPES.X.H.G.
0.4051.1Os07g0101300AK068020.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein1e-1At3g18520HDA15S.X.H.G.
0.3541.7Os02g0722400AK070030.1-Amino acid transporter c (Fragment)2e-4At5g23810AAP7S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
20.999.2GSM262021Nipponbare, 11 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
17.298.8GSM262016Nipponbare, 4 days after infection with S. hermonthica, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
14.998.6GSM262014Nipponbare, 4 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
14.698.6GSM262010Nipponbare, 2 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
12.798.4GSM262011Nipponbare, 2 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
11.598.2GSM262015Nipponbare, 4 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
11.498.2GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.398.2GSM261999IAC165, 2 days after mock-infection, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.798.1GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.697.9GSM262006IAC165, 11 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.252e-31139Os01g0743300AK069026.1-Protease-associated PA domain containing protein2e-2At3g54720AMP1 (ALTERED MERISTEM PROGRAM 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-552Arabidopsis thalianaAt3g54720824637AMP1 (ALTERED MERISTEM PROGRAM 1)Encodes glutamate carboxypeptidase. Various alleles show-increased cotyledon number and rate of leaf initiation, show transformation of leaves to cotyledons, altered flowering time and photomorphogenesis and an increased level of cytokinin biosynthesis. Involved in ethylene enhanced hypocotyl elongation in the light. Strong genetic interaction between TGH and AMP1.---C.G.S.X.
0.066e-344Glycine maxGmaAffx.48644.1.S1_atAW620338--9e-13At5g19740peptidase M28 family proteinC.G.S.X.
0.167e-25115Hordeum vulgareContig10185_atContig10185--8e-1At3g54720AMP1 (ALTERED MERISTEM PROGRAM 1)C.G.S.X.
0.016e+034Populus trichocarpaPtpAffx.217154.1.S1_atpmrna32305hypothetical protein-4e-1At3g13857unknown proteinC.G.S.X.
0.392e-100367Triticum aestivumTa.9132.3.S1_s_atCA640252--7e-1At5g19740peptidase M28 family proteinC.G.S.X.
0.027e-238Vitis vinifera1616292_atCF209464--2e+0At5g19740peptidase M28 family proteinC.G.S.X.
0.027e-342Zea maysZm.10769.1.A1_atCF624289glutamate carboxypeptidase 2-2e+0At2g18890protein kinase family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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