Gene omics information

Query gene ID	Os01g0723700
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.67	87.2	Os01g0723700	9629.m05098	-	Transcriptional factor B3 family protein	1e+0	At3g49560	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.60	79.7	Os06g0561800	9634.m03485	-	Multidrug resistance associated protein 1	8e-9	At3g21250	ATMRP6	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	Os09g0480300	CA762735	-	SWIM Zn-finger domain containing protein	1e+0	At5g41810	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.50	68.0	Os10g0545400	9638.m03606	-	Nucleic acid-binding OB-fold domain containingprotein	6e-1	At5g62320	ATMYB99 (MYB DOMAIN PROTEIN 99)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.40	51.1	Os01g0976100	AK069646.1	-	ABC transporter, transmembrane region domaincontaining protein	4e-77	At3g55320	PGP20 (P-GLYCOPROTEIN 20)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.40	51.1	Os01g0301700	AK100563.1	-	TPR-like domain containing protein	5e+0	At5g02780	In2-1 protein, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.38	46.9	Os01g0930300	AK103050.1	-	Conserved hypothetical protein	2e-1	At1g27930	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
48.8	99.9	GSM422672	Drought	GSE16865	Heterologous microarrays for the study of drought stress in Musa
39.6	99.9	GSM377072	Genomic DNA - 45 day old leaf sample - mutant d1137	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
37.9	99.8	GSM377075	Genomic DNA - 45 day old leaf sample - mutant g650	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.0	99.7	GSM377084	Genomic DNA - 45 day old leaf sample - mutant f1856	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.8	99.6	GSM377080	Genomic DNA - 45 day old leaf sample - mutant g6728	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.6	99.5	GSM377071	Genomic DNA - 45 day old leaf sample - mutant d256	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.1	99.3	GSM377073	Genomic DNA - 45 day old leaf sample - mutant d2943	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.2	99.0	GSM377070	Genomic DNA - 45 day old leaf sample - mutant d1	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.1	99.0	GSM377077	Genomic DNA - 45 day old leaf sample - mutant g6489	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.8	98.9	GSM377085	Genomic DNA - 45 day old leaf sample - mutant f2045	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	2e-12	75	Os07g0253100	AK069101.1	-	Hypothetical protein	1e+0	At2g35635	UBQ7	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	5e-1	38	Os06g0726800	AK070518.1	-	G2/mitotic-specific cyclin 2 (B-like cyclin)(CycOs2)	4e-6	At1g20590	cyclin, putative	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	2e+0	36	Os01g0922700	9629.m06891	-	Hypothetical protein	7e-2	At1g27760	interferon-related developmental regulator family protein / IFRD protein family	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	2e+0	36	Os03g0178300	AK121217.1	-	Alpha/beta hydrolase family protein	7e-1	At5g49210	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	2e+0	36	Os03g0860000	AK066505.1	-	Conserved hypothetical protein	6e-2	At3g60080	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	2e+0	36	Os06g0255300	AK066536.1	-	Hypothetical protein	1e+0	At1g22450	COX6B (CYTOCHROME C OXIDASE 6B)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	2e+0	36	Os09g0560600	AK070937.1	-	Eukaryotic protein of unknown function DUF284family protein	1e-5	At3g12740	ALIS1 (ALA-INTERACTING SUBUNIT 1)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.01	1e+0	36	Arabidopsis thaliana	At3g49560	824118	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	F:protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:protein transport;C:in 6 components;PMO	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.01	2e+0	36	Glycine max	GmaAffx.69373.1.S1_s_at	BF598526	-	-	2e-5	At4g20850	TPP2 (TRIPEPTIDYL PEPTIDASE II)	C.G.	S.X.	Please select
0.12	1e-20	101	Hordeum vulgare	HI07D23r_at	HI07D23r	-	-	4e+0	At3g55290	short-chain dehydrogenase/reductase (SDR) family protein	C.G.	S.X.	Please select
0.01	2e+0	36	Populus trichocarpa	Ptp.7984.1.S1_at	DN502965	hypothetical protein	-	1e-6	At5g35410	SOS2 (SALT OVERLY SENSITIVE 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.25	2e-45	184	Triticum aestivum	Ta.10850.1.S1_at	BQ166692	-	-	1e-1	At5g63060	transporter	C.G.	S.X.	Please select
0.01	8e-2	38	Vitis vinifera	1613247_at	CF517268	hypothetical protein LOC100243478	-	2e-11	At5g18250	unknown protein	C.G.	S.X.	Please select
0.01	2e+0	34	Zea mays	Zm.14275.1.A1_at	AY108619.1	verprolin	-	1e+0	At1g35435	-	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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