CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0717400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.6 Os01g0717400 AK072165.1 - Alliinase EGF-like domain containing protein 9e-1 At5g44860 unknown protein S.X. H.G.
0.57 77.0 Os12g0514000 AK099395.1 - Sugar transporter family protein 6e-2 At3g18830 ATPLT5 (POLYOL TRANSPORTER 5) S.X. H.G.
0.23 21.2 Os07g0628700 AK111594.1 - Receptor protein kinase 8e-5 At4g23200 protein kinase family protein S.X. H.G.
0.13 8.2 Os10g0421800 AK119359.1 - Protein prenyltransferase domain containingprotein 5e-1 At5g49700 DNA-binding protein-related S.X. H.G.
0.10 5.7 Os01g0810100 AK071916.1 - Ribonuclease III domain containing protein 3e-22 At4g37510 ribonuclease III family protein S.X. H.G.
0.09 4.9 Os07g0569600 AK067599.1 - Conserved hypothetical protein 7e-12 At5g19855 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
44.7 99.9 GSM421698 XOO, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
33.3 99.8 GSM421678 XOC, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
28.3 99.6 GSM421718 MOCK, 8 hai - rep4 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
17.3 98.9 GSM421716 MOCK, 8 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
17.0 98.8 GSM421677 XOC, 8 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
16.9 98.8 GSM421696 XOO, 8 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
15.0 98.6 GSM421717 MOCK, 8 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.2 98.5 GSM421724 MOCK, 96 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
13.1 98.4 GSM421715 MOCK, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
10.6 98.1 GSM421697 XOO, 8 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.77 0 1800 Os01g0717700 AK064938.1 - Allinase, C-terminal domain containing protein 4e+0 At1g15190 - C.G. S.X.
0.03 5e-4 48 Os05g0169300 AK071481.1 - Alliinase EGF-like domain containing protein 9e-7 At1g70560 TAA1 (TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1) C.G. S.X.
0.02 5e-4 48 Os11g0631500 9639.m03799 - - 6e-1 At1g21940 unknown protein C.G. S.X.
0.01 3e-2 42 Os07g0232900 9635.m01270 - Heavy metal translocating P-type ATPase familyprotein 3e-11 At4g30110 HMA2 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 9e-1 36 Arabidopsis thaliana At5g44860 834516 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOM - - - C.G. S.X.
0.02 1e+0 36 Glycine max PsAffx.psMY005iB12r_at PsAffx.psMY005iB12r - - 1e+0 At3g01070 plastocyanin-like domain-containing protein C.G. S.X.
0.21 1e-35 151 Hordeum vulgare Contig26136_at Contig26136 - - 5e+0 At3g46320 histone H4 C.G. S.X.
0.02 5e-3 44 Populus trichocarpa PtpAffx.201774.1.S1_at pmrna3544 hypothetical protein - 7e-1 At4g10250 ATHSP22.0 C.G. S.X.
0.27 3e-47 190 Triticum aestivum TaAffx.85678.1.S1_at CA620619 - - 4e+0 At5g28090 unknown protein C.G. S.X.
0.01 4e+0 32 Vitis vinifera 1614248_at CF214410 - - 2e-1 At1g09250 transcription factor C.G. S.X.
0.14 1e-13 77 Zea mays Zm.10633.1.A1_at BQ538720 hypothetical protein LOC100273094 /// alliin lyase - 2e+1 At5g47175 LCR3 (Low-molecular-weight cysteine-rich 3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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