CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0715000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.86 96.4 Os01g0715000 AK120627.1 - The start codon is not identified. 6e-8 At5g20220 zinc knuckle (CCHC-type) family protein S.X. H.G.
0.77 93.1 Os04g0278900 AK108886.1 - Dihydrouridine synthase, DuS family protein 2e-3 At3g63510 FAD binding / catalytic/ tRNA dihydrouridine synthase S.X. H.G.
0.73 91.1 Os09g0248000 AK120327.1 - Conserved hypothetical protein 1e-7 At2g03800 GEK1 (GEKO1) S.X. H.G.
0.63 82.7 Os05g0243200 AK066379.1 - Ribosomal protein L13 1e-1 At1g49310 unknown protein S.X. H.G.
0.61 81.2 Os01g0704700 NM_191637.1 - Chloride channel protein CLC-e (AtCLC-e) 4e-3 At4g35440 CLC-E (CHLORIDE CHANNEL E) S.X. H.G.
0.57 77.0 Os01g0390400 AK106834.1 - Nucleic acid-binding OB-fold domain containingprotein 4e-16 At4g27340 Met-10+ like family protein S.X. H.G.
0.50 68.0 Os01g0960300 BI813093 - Glucose inhibited division protein A 7e+0 At5g57510 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.4 99.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
6.9 97.3 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.8 97.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.5 97.2 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.3 97.2 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.1 97.1 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.8 97.0 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.6 96.9 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.5 96.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.5 96.8 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 4e-21 103 Os12g0512400 AK065758.1 - Hypothetical protein 2e+0 At5g01430 Got1-like family protein C.G. S.X.
0.02 9e-10 65 Os04g0173300 AK063632.1 - Hypothetical protein 1e-1 At3g61060 AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13) C.G. S.X.
0.02 5e-2 40 Os03g0754200 AK103031.1 - The start codon is not identified. 1e+0 At5g20110 dynein light chain, putative C.G. S.X.
0.02 4e+0 34 Os02g0593900 9630.m03653 - Protein of unknown function DUF691 family protein 2e-18 At5g40530 - C.G. S.X.
0.02 4e+0 34 Os03g0263500 AK106060.1 - Cappuccino protein 1e-5 At2g32600 hydroxyproline-rich glycoprotein family protein C.G. S.X.
0.01 2e-1 38 Os06g0300800 AK111728.1 - The start codon is not identified. 2e-6 At3g13290 VCR (VARICOSE-RELATED) C.G. S.X.
0.01 1e+0 36 Os01g0173200 9631.m04720 - - 6e-1 At2g05380 GRP3S (GLYCINE-RICH PROTEIN 3 SHORT ISOFORM) C.G. S.X.
0.01 1e+0 36 Os02g0831400 AK122003.1 - Conserved hypothetical protein 3e+0 At4g19645 - C.G. S.X.
0.01 1e+0 36 Os08g0499300 AK065518.1 - WRKY transcription factor 30 1e-22 At4g26640 WRKY20 C.G. S.X.
0.01 4e+0 34 Os04g0692700 9632.m05831 - SNF2-related domain containing protein 2e-16 At5g63950 CHR24 (chromatin remodeling 24) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.09 6e-8 59 Arabidopsis thaliana At5g20220 832144 zinc knuckle (CCHC-type) family protein F:unfolded protein binding, heat shock protein binding, zinc ion binding, nucleic acid binding;P:protein folding;C:unknown;VMFOPB - - - C.G. S.X.
0.02 1e+0 36 Glycine max HgAffx.8697.1.S1_at CB379804 - - 4e+0 At3g26660 LBD24 (LOB DOMAIN-CONTAINING PROTEIN 24) C.G. S.X.
0.02 2e+0 34 Hordeum vulgare Contig8970_at Contig8970 - - 1e-2 At5g20560 beta-1,3-glucanase, putative C.G. S.X.
0.04 5e-3 44 Populus trichocarpa PtpAffx.208801.1.S1_at pmrna17449 hypothetical protein - 3e-29 At5g20220 zinc knuckle (CCHC-type) family protein C.G. S.X.
0.36 3e-102 373 Triticum aestivum TaAffx.16009.1.A1_at BQ801005 - - 2e-2 At5g20220 zinc knuckle (CCHC-type) family protein C.G. S.X.
0.02 3e-1 36 Vitis vinifera 1611283_at CB341968 hypothetical protein LOC100254717 - 2e-2 At4g23060 IQD22 (IQ-domain 22) C.G. S.X.
0.02 2e+0 34 Zea mays ZmAffx.52.1.A1_at AI665021 - - 1e-1 At3g07110 60S ribosomal protein L13A (RPL13aA) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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