CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0708300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 68.0 Os01g0708300 AK073555.1 - Conserved hypothetical protein 2e-11 At5g11960 unknown protein S.X. H.G.
0.55 73.7 Os08g0384000 CB627303 - Cytochrome b561 family protein 2e+0 At2g33220 - S.X. H.G.
0.38 46.9 Os03g0324800 AK071431.1 - Hypothetical protein 9e+0 At5g47170 unknown protein S.X. H.G.
0.35 41.7 Os01g0496900 AK069894.1 - P-type trefoil domain containing protein 2e-39 At3g16200 unknown protein S.X. H.G.
0.20 16.5 Os08g0467400 AK105607.1 - Zinc transporter ZIP family protein 3e-10 At1g68100 IAR1 (IAA-ALANINE RESISTANT 1) S.X. H.G.
0.16 11.3 Os01g0168300 AK063678.1 - Conserved hypothetical protein 7e-10 At3g56430 - S.X. H.G.
0.16 11.3 Os12g0285500 CA764242 - Hypothetical protein 1e-7 At3g48380 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.1 98.2 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
10.3 98.1 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.2 98.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
9.3 97.9 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.6 97.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.8 97.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.4 97.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.2 97.4 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.1 97.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.9 97.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-2 40 Os11g0631300 9639.m03797 - - 4e-1 At1g77090 thylakoid lumenal 29.8 kDa protein C.G. S.X.
0.02 3e-1 38 Os01g0761500 AK069522.1 - TGF-beta receptor, type I/II extracellular regionfamily protein 1e+0 At3g16300 integral membrane family protein C.G. S.X.
0.02 1e+0 36 Os09g0433500 9637.m02294 - Glycosyl transferase, family 31 protein 5e-1 At3g29300 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 2e-11 71 Arabidopsis thaliana At5g11960 831069 unknown protein F:molecular_function unknown;P:biological_process unknown;C:membrane;MBPFO - - - C.G. S.X.
0.07 3e-7 57 Glycine max GmaAffx.60062.1.S1_at BM308282 - - 3e-3 At5g11960 unknown protein C.G. S.X.
0.42 2e-64 246 Hordeum vulgare Contig17573_at Contig17573 - - 2e+0 At3g24270 APUM25 (Arabidopsis Pumilio 25) C.G. S.X.
0.06 1e-3 46 Populus trichocarpa PtpAffx.206666.1.S1_at pmrna13229 hypothetical protein - 5e-32 At5g11960 unknown protein C.G. S.X.
0.34 1e-73 278 Triticum aestivum Ta.7510.1.A1_at BJ235235 - - 4e-1 At4g09720 Ras-related GTP-binding protein, putative C.G. S.X.
0.07 2e-8 59 Vitis vinifera 1608779_at CB969675 hypothetical protein LOC100243991 - 3e-23 At5g11960 unknown protein C.G. S.X.
0.02 2e+0 34 Zea mays Zm.17968.1.A1_at CK827143 - - 2e+0 At5g02960 40S ribosomal protein S23 (RPS23B) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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