CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0704700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os01g0704700 NM_191637.1 - Chloride channel protein CLC-e (AtCLC-e) 4e-3 At4g35440 CLC-E (CHLORIDE CHANNEL E) S.X. H.G.
0.91 98.9 Os09g0248000 AK120327.1 - Conserved hypothetical protein 1e-7 At2g03800 GEK1 (GEKO1) S.X. H.G.
0.83 95.8 Os04g0278900 AK108886.1 - Dihydrouridine synthase, DuS family protein 2e-3 At3g63510 FAD binding / catalytic/ tRNA dihydrouridine synthase S.X. H.G.
0.67 87.2 Os01g0715000 AK120627.1 - The start codon is not identified. 6e-8 At5g20220 zinc knuckle (CCHC-type) family protein S.X. H.G.
0.55 73.7 Os01g0960300 BI813093 - Glucose inhibited division protein A 7e+0 At5g57510 unknown protein S.X. H.G.
0.40 51.1 Os12g0193100 AK068584.1 - Subtilisin inhibitor I (ASI-I) [Contains:Subtilisin inhibitor II (ASI-II)] 6e-1 At3g61840 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
37.4 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
13.6 98.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.5 97.9 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.7 97.8 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.1 97.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.8 97.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.8 97.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.4 97.5 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.5 97.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.2 97.1 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e-5 52 Os08g0499200 AK120828.1 - Cl- channel, voltage gated family protein 1e-65 At1g55620 CLC-F (CHLORIDE CHANNEL F) C.G. S.X.
0.01 3e-2 42 Os01g0826900 AK105709.1 - Protein of unknown function DUF399 family protein 3e-32 At2g40400 unknown protein C.G. S.X.
0.01 1e-1 40 Os01g0329400 AK101813.1 - Mitochondrial substrate carrier family protein 9e-1 At5g15640 mitochondrial substrate carrier family protein C.G. S.X.
0.01 1e-1 40 Os05g0149200 9633.m00483 - PWWP domain containing protein 4e-1 At1g16510 auxin-responsive family protein C.G. S.X.
0.01 1e-1 40 Os08g0144300 9636.m00417 - - 1e+0 At3g43520 unknown protein C.G. S.X.
0.01 1e-1 40 Os08g0416400 AK064144.1 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 2e-1 At1g62240 unknown protein C.G. S.X.
0.01 1e-1 40 Os12g0422700 AU031189 - En/Spm-like transposon proteins family protein 1e+0 At2g03570 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 4e-3 44 Arabidopsis thaliana At4g35440 829696 CLC-E (CHLORIDE CHANNEL E) Enclodes a choride channel protein that is localized to the thlakoid membrane. - - - C.G. S.X.
0.02 2e+0 36 Glycine max GmaAffx.41724.1.S1_at BI968713 - - 3e+0 At5g48240 unknown protein C.G. S.X.
0.01 5e-1 36 Hordeum vulgare Contig16034_at Contig16034 - - 7e-2 At5g62320 ATMYB99 (MYB DOMAIN PROTEIN 99) C.G. S.X.
0.06 4e-7 57 Populus trichocarpa PtpAffx.222510.1.S1_at pmrna39990 Cl-channel clc-7 - 3e-34 At4g35440 CLC-E (CHLORIDE CHANNEL E) C.G. S.X.
0.02 7e-2 40 Triticum aestivum TaAffx.25558.2.S1_at CA647241 - - 7e-21 At2g47640 small nuclear ribonucleoprotein D2, putative / snRNP core protein D2, putative / Sm protein D2, putative C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1620986_at CF372684 - - 2e-2 At2g31957 LCR75 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 75) C.G. S.X.
0.01 1e-1 38 Zea mays Zm.4061.1.A1_at AI834355 - - 3e+0 At3g25030 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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