CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0676200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0676200 AK070436.1 - Conserved hypothetical protein 2e+0 At4g13720 inosine triphosphate pyrophosphatase, putative / HAM1 family protein S.X. H.G.
0.91 98.9 Os07g0105600 AK068377.1 - Photosystem II oxygen evolving complex proteinPsbQ family protein 1e-1 At5g56840 DNA-binding family protein S.X. H.G.
0.73 91.1 Os02g0773500 AK062694.1 - Conserved hypothetical protein 1e-3 At5g56950 NAP1 S.X. H.G.
0.67 87.2 Os10g0533100 AK111957.1 - Conserved hypothetical protein 5e-1 At2g40020 - S.X. H.G.
0.67 87.2 Os03g0158300 AK066591.1 - Conserved hypothetical protein 3e+0 At1g07950 surfeit locus protein 5 family protein / SURF5 family protein S.X. H.G.
0.46 60.9 Os02g0751600 AK072946.1 - Peptidylprolyl isomerase, FKBP-type domaincontaining protein 4e-2 At5g03030 DNAJ heat shock N-terminal domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.9 99.2 GSM267999 Green leaves in F9G RILs from parents lines GSE10872 Molecular characterization and genetic analysis reveal SA0420 as an early senescing rice mutant with pleotropic
15.9 98.7 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
15.7 98.7 GSM421695 XOO, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
14.0 98.5 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
13.7 98.5 GSM421717 MOCK, 8 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
13.0 98.4 GSM421715 MOCK, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.9 98.4 GSM421675 XOC, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.6 98.4 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
12.5 98.3 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
12.5 98.3 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-3 44 Os09g0559700 9637.m03292 - - 1e-1 At3g29300 unknown protein C.G. S.X.
0.02 3e-4 48 Os05g0551500 AK108248.1 - Conserved hypothetical protein 6e-2 At1g49820 ATMTK (ARABIDOPSIS THALIANA S-METHYL-5-THIORIBOSE KINASE) C.G. S.X.
0.02 1e-3 46 Os01g0181400 NM_190755.1 - - 2e+0 At1g27950 LTPG1 (GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1) C.G. S.X.
0.02 4e-3 44 Os05g0517100 9633.m04111 - - 3e-2 At5g01840 OFP1 (OVATE FAMILY PROTEIN 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At4g13720 827006 inosine triphosphate pyrophosphatase, putative / HAM1 family protein F:hydrolase activity, pyrophosphatase activity;P:biological_process unknown;C:unknown;BOAMFPV - - - C.G. S.X.
0.03 2e-1 38 Glycine max Gma.3436.1.S1_at BQ628716 - - 2e-1 At5g08330 TCP family transcription factor, putative C.G. S.X.
0.03 2e-2 40 Hordeum vulgare EBem05_SQ004_K20_at EBem05_SQ004_K20 - - 3e+0 At2g17442 unknown protein C.G. S.X.
0.02 2e-1 38 Populus trichocarpa PtpAffx.208589.1.S1_at pmrna17046 hypothetical protein - 3e-1 At5g65640 bHLH093 (beta HLH protein 93) C.G. S.X.
0.56 1e-81 303 Triticum aestivum Ta.17622.1.S1_at CA622688 - - 3e-2 At5g33390 glycine-rich protein C.G. S.X.
0.03 1e-1 36 Vitis vinifera 1611981_at CF403805 - - 6e-2 At4g13720 inosine triphosphate pyrophosphatase, putative / HAM1 family protein C.G. S.X.
0.02 3e-3 42 Zea mays Zm.11832.1.S1_at BM381116 hypothetical protein LOC100277564 - 1e-7 At1g57540 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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