CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0663200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0663200 9629.m04543 - - 6e-1 At1g62240 unknown protein S.X. H.G.
0.60 79.7 Os05g0507500 9633.m04013 - - 4e-1 At4g18335 unknown protein S.X. H.G.
0.50 68.0 Os12g0180500 9640.m00731 - - 3e-7 At1g77280 protein kinase family protein S.X. H.G.
0.50 68.0 Os04g0245800 9632.m01551 - - 3e-1 At1g30850 unknown protein S.X. H.G.
0.34 40.0 Os11g0275600 9636.m01390 - - 6e-1 At2g40170 GEA6 (LATE EMBRYOGENESIS ABUNDANT 6) S.X. H.G.
0.33 38.8 Os04g0512750 9632.m04151 - - 3e+0 At1g43700 VIP1 (VIRE2-INTERACTING PROTEIN 1) S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.4 99.7 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.4 99.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.1 99.7 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.9 99.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.5 99.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.2 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.2 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.6 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.2 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.9 99.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 5e-34 145 Os01g0663050 NM_192502.1 - - 6e+0 At5g51170 unknown protein C.G. S.X.
0.07 3e-7 56 Os10g0382200 9638.m02011 - - 1e+0 At1g07610 MT1C C.G. S.X.
0.05 8e-5 48 Os01g0680700 AK120014.1 - Conserved hypothetical protein 8e-2 At4g21720 unknown protein C.G. S.X.
0.02 8e-2 38 Os01g0183600 AK110852.1 - Cytochrome P450 family protein 2e-1 At2g21910 CYP96A5 C.G. S.X.
0.01 3e-1 36 Os09g0538700 9637.m03102 - Protein of unknown function DUF630 domaincontaining protein 1e-6 At3g51290 proline-rich family protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e-1 34 Arabidopsis thaliana At1g62240 842521 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA - - - C.G. S.X.
0.04 3e+0 32 Glycine max PsAffx.psZS006xN05f_at PsAffx.psZS006xN05f - - 1e+0 At4g34290 SWIB complex BAF60b domain-containing protein C.G. S.X.
0.04 3e-1 34 Hordeum vulgare Contig24683_at Contig24683 - - 7e-2 At3g32160 unknown protein C.G. S.X.
0.05 3e+0 32 Populus trichocarpa PtpAffx.221443.1.S1_at pmrna38335 - - 4e-5 At5g40280 ERA1 (ENHANCED RESPONSE TO ABA 1) C.G. S.X.
0.04 6e-1 34 Triticum aestivum Ta.8860.2.S1_a_at BG909354 - - 3e+0 At4g23930 - C.G. S.X.
0.06 1e+1 28 Vitis vinifera 1620940_at CF201899.1 - - 2e+1 At5g66990 RWP-RK domain-containing protein C.G. S.X.
0.07 1e+0 32 Zea mays ZmAffx.845.1.A1_at AI770615 - - 3e-2 At3g50980 XERO1 (DEHYDRIN XERO 1) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage