Gene omics information

Query gene ID Os01g0656400
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6787.2Os01g06564009629.m04484-WRKY transcription factor 158e-3At3g11820SYP121 (SYNTAXIN OF PLANTS 121)S.X.H.G.
0.5573.7Os05g0546400AK109087.1-Conserved hypothetical protein1e-1At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeS.X.H.G.
0.4051.1Os01g0864500AK068115.1-Harpin-induced 1 domain containing protein8e+0At5g47080CKB1S.X.H.G.
0.3338.8Os05g0181700AK066089.1-Hypothetical protein3e+0At4g13720inosine triphosphate pyrophosphatase, putative / HAM1 family proteinS.X.H.G.
0.2524.1Os08g0384500AK100858.1-PDR-like ABC transporter (PDR3 ABC transporter)2e-33At1g15520PDR12 (PLEIOTROPIC DRUG RESISTANCE 12)S.X.H.G.
0.1813.7Os04g0586500AK106447.1-Conserved hypothetical protein4e+0At3g51550FER (FERONIA)S.X.H.G.
0.1611.3Os09g0334500AK065265.1--9e-4At4g39410WRKY13S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
51.299.9GSM375765gid1-3_ shoot_replicate 1GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
43.699.9GSM375766gid1-3_ shoot_replicate 2GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
38.399.8GSM375767gid1-3_ shoot_replicate 3GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
22.699.3GSM278845WuYun3-RSV infected, biological rep2GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
19.899.1GSM278844WuYun3-RSV infected, biological rep1GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
16.898.8GSM278852KT95-418-RSV infected, biological rep3GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
16.098.7GSM375775slr1 (k1001)_ shoot_replicate 2GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
15.098.6GSM278846WuYun3-RSV infected, biological rep3GSE11025Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
9.597.9GSM375773slr1 (k1001)_ shoot_replicate 1GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
9.597.9GSM375647Taichung 65_shoot_replicate 1GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.161e-1275Os11g06857009639.m04272-WRKY transcription factor 611e-1At1g66600WRKY63C.G.S.X.
0.151e-52208Os05g0571200AK108389.1-WRKY transcription factor 191e-4At5g24110WRKY30C.G.S.X.
0.157e-1169Os06g01581009634.m00564-WRKY transcription factor 632e-7At5g24110WRKY30C.G.S.X.
0.056e-550Os05g05285009633.m04232--2e-2At2g46130WRKY43C.G.S.X.
0.047e-859Os07g04609009635.m02680--2e+0At4g16240unknown proteinC.G.S.X.
0.046e-550Os11g0686400CA760141-Disease resistance protein family protein3e-1At3g01970WRKY45C.G.S.X.
0.032e-861Os01g0821600AK108657.1-DNA-binding WRKY domain containing protein2e-1At4g09460ATMYB6C.G.S.X.
0.023e-757Os04g0471700AY341851.1-WRKY10 (WRKY transcription factor 35)1e-3At4g26440WRKY34 (WRKY DNA-BINDING PROTEIN 34)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.038e-342Arabidopsis thalianaAt3g11820820355SYP121 (SYNTAXIN OF PLANTS 121)Encodes a syntaxin localized at the plasma membrane (SYR1, Syntaxin Related Protein 1, also known as SYP121, PENETRATION1/PEN1). SYR1/PEN1 is a member of the SNARE superfamily proteins. SNARE proteins are involved in cell signaling, vesicle traffic, growth and development. SYR1/PEN1 functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew, Blumeria graminis sp. hordei. SYR1/PEN1 is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance.---C.G.S.X.
0.032e-138Glycine maxHgAffx.12338.1.S1_atCB375644--4e-6At4g17950DNA-binding family proteinC.G.S.X.
0.172e-41169Hordeum vulgareContig21110_atContig21110--4e-1At1g71520AP2 domain-containing transcription factor, putativeC.G.S.X.
0.042e-138Populus trichocarpaPtpAffx.99356.1.S1_atAJ779611--2e-3At1g47970unknown proteinC.G.S.X.
0.236e-56218Triticum aestivumTaAffx.109191.2.S1_atCA680198WRKY15 transcription factor-1e+0At5g07100WRKY26C.G.S.X.
0.032e+032Vitis vinifera1609989_atCF415187--2e+1At4g08190Ras-related GTP-binding protein, putativeC.G.S.X.
0.116e-1167Zea maysZm.18098.1.A1_atCK347304--7e-6At5g24110WRKY30C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage