CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0631700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os01g0631700 AK065494.1 - Ser Thr specific protein kinase-like protein 9e-23 At2g42960 protein kinase family protein S.X. H.G.
0.80 94.6 Os02g0756100 AK060615.1 - Conserved hypothetical protein 2e+0 At3g12140 emsy N terminus domain-containing protein / ENT domain-containing protein S.X. H.G.
0.80 94.6 Os11g0308800 AK068828.1 - Protein kinase-like domain containing protein 5e-1 At3g56800 CAM3 (CALMODULIN 3) S.X. H.G.
0.80 94.6 Os03g0320800 AK103265.1 - Protein kinase domain containing protein 3e-2 At4g34670 40S ribosomal protein S3A (RPS3aB) S.X. H.G.
0.27 27.5 Os05g0406800 AK062566.1 - Leucine-rich repeat, plant specific containingprotein 2e-2 At3g53235 unknown protein S.X. H.G.
0.26 25.6 Os02g0702600 AK102962.1 - Protein of unknown function DUF315 domaincontaining protein 3e-1 At4g30480 tetratricopeptide repeat (TPR)-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
13.9 98.5 GSM99860 TCHW P3_m103 control, biological rep3 GSE4438 Expression data from rice under salinity stress
10.6 98.1 GSM99859 TCHW P2_m103 control, biological rep2 GSE4438 Expression data from rice under salinity stress
10.5 98.1 GSM409428 Nipponbare_young panicle 2cm, biological rep4 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
10.2 98.0 GSM99858 TCHW P1_m103 control, biological rep1 GSE4438 Expression data from rice under salinity stress
9.5 97.9 GSM429983 Rice mutant phoenix (pho) panicle rep1 GSE17194 Genome-wide gene expression profiling of rice Indica cultivar Zhongxian 3037 and mutant phoenix (pho) panicle
8.0 97.6 GSM409421 Nipponbare_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
8.0 97.6 GSM409433 9311_young panicle 2cm, biological rep4 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
7.6 97.5 GSM99874 TCHW P17_agami salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
7.5 97.5 GSM99870 TCHW P13_agami control, biological rep1 GSE4438 Expression data from rice under salinity stress
6.9 97.3 GSM99871 TCHW P14_agami control, biological rep2 GSE4438 Expression data from rice under salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.23 3e-30 135 Os10g0497600 AK103003.1 - Protein kinase domain containing protein 1e-25 At3g59110 protein kinase family protein C.G. S.X.
0.15 3e-13 77 Os01g0323000 AK100396.1 - Ser Thr specific protein kinase-like protein 5e-12 At1g56720 protein kinase family protein C.G. S.X.
0.13 2e-31 139 Os01g0664200 AK100061.1 - Protein kinase domain containing protein 2e-14 At1g56720 protein kinase family protein C.G. S.X.
0.10 3e-10 67 Os01g0601200 AK061398.1 - Ser Thr specific protein kinase-like protein 3e-6 At1g56720 protein kinase family protein C.G. S.X.
0.09 4e-17 91 Os12g0108100 CB629063 - Ser Thr specific protein kinase-like protein 2e+0 At4g22000 unknown protein C.G. S.X.
0.02 4e-8 61 Os01g0195200 AK105501.1 - Serine/threonine-protein kinase PBS1 (EC 2.7.1.37)(AvrPphB susceptible protein 1) 3e-10 At2g20300 ALE2 (Abnormal Leaf Shape 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 2e-7 57 Arabidopsis thaliana At1g09440 837467 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA - - - C.G. S.X.
0.12 1e-2 42 Glycine max GmaAffx.32382.1.S1_at BG237899 - - 4e-22 At1g09440 protein kinase family protein C.G. S.X.
0.59 2e-175 615 Hordeum vulgare Contig11532_at Contig11532 - - 1e-22 At2g42960 protein kinase family protein C.G. S.X.
0.17 2e-7 57 Populus trichocarpa PtpAffx.205660.1.S1_at pmrna11176 hypothetical protein - 2e-121 At2g42960 protein kinase family protein C.G. S.X.
0.58 1e-168 593 Triticum aestivum Ta.11367.2.S1_at BJ207672 - - 6e-14 At2g42960 protein kinase family protein C.G. S.X.
0.04 2e-4 46 Vitis vinifera 1616357_at CF516994 hypothetical protein LOC100255530 - 5e-16 At2g17220 protein kinase, putative C.G. S.X.
0.15 4e-25 115 Zea mays Zm.4589.1.A1_at CA401701 Protein kinase-like - 4e-31 At3g59110 protein kinase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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