Gene omics information

Query gene ID Os01g0631200
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5777.0Os01g0631200AK072497.1-The start codon is not identified.3e-15At5g40850UPM1 (UROPHORPHYRIN METHYLASE 1)S.X.H.G.
0.4863.7Os04g0415000AK108662.1-Conserved hypothetical protein1e-1At5g41761unknown proteinS.X.H.G.
0.4458.1Os03g0784700D17410.1--3e-65At4g05390ATRFNR1 (ROOT FNR 1)S.X.H.G.
0.3541.7Os08g0151800AK099848.1-Pyridine nucleotide-disulphide oxidoreductase,class I family protein8e-26At1g63940monodehydroascorbate reductase, putativeS.X.H.G.
0.3440.0Os04g0434800AB114855.1-Stromal ascorbate peroxidase9e-19At1g77490TAPX (THYLAKOIDAL ASCORBATE PEROXIDASE)S.X.H.G.
0.3032.7Os08g0417100CR283653-Isopenicillin N synthase family protein4e+0At5g43850ARD4S.X.H.G.
0.3032.7Os05g0443500AK103416.1-Ferredoxin, root R-B13e+0At3g17590BSH (BUSHY GROWTH)S.X.H.G.
0.3032.7Os04g0311400AK121305.1-Cysteine proteinase 1 precursor (EC 3.4.22.-)3e-13At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)S.X.H.G.
0.2831.1Os02g0198500AK063694.1-Conserved hypothetical protein5e-3At1g32290unknown proteinS.X.H.G.
0.2625.6Os08g0118000AK068379.1-HMG-I and HMG-Y, DNA-binding domain containingprotein2e-8At4g12080DNA-binding family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
29.999.7GSM359923Pokkali root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
19.599.1GSM359922Pokkali root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
14.998.6GSM359917IR63731 root, salt-treated, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
13.198.4GSM261998IAC165, 2 days after mock-infection, biological replicate #1GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.598.1GSM359918IR63731 root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
10.298.0GSM359924Pokkali root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
9.898.0GSM262005IAC165, 4 days after infection with S. hermonthica, biological replicate #2GSE10373Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
8.297.7GSM359916IR63731 root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
8.297.7GSM359914IR63731 root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
7.597.5GSM359915IR63731 root, control, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.026e-344Os04g0589900AB110206.1-HMG-I and HMG-Y, DNA-binding domain containingprotein9e-1At3g47120RNA recognition motif (RRM)-containing proteinC.G.S.X.
0.021e+036Os03g0567100AK109220.1-Conserved hypothetical protein5e+0At5g48290heavy-metal-associated domain-containing proteinC.G.S.X.
0.011e-346Os05g0391500AK119412.1-Glycosyl hydrolase4e-29At1g09010glycoside hydrolase family 2 proteinC.G.S.X.
0.016e-344Os03g0748400AK070433.1-Serine protein kinase-like protein1e-16At3g44850protein kinase-relatedC.G.S.X.
0.016e-344Os10g0542200AK065246.1-Ubiquitin domain containing protein5e-6At2g17200ubiquitin family proteinC.G.S.X.
0.011e+036Os04g0173300AK063632.1-Hypothetical protein1e-1At3g61060AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13)C.G.S.X.
0.011e+036Os05g0491100AF441190.1-Calmodulin1e-90At3g56800CAM3 (CALMODULIN 3)C.G.S.X.
0.011e+036Os08g0566000AK067576.1-TENA/THI-4 protein domain containing protein2e-2At2g32720CB5-B (CYTOCHROME B5 ISOFORM B)C.G.S.X.
0.011e+036Os12g0133400AK071502.1-4'-phosphopantetheinyl transferase domaincontaining protein2e+0At5g54460wound-responsive protein-relatedC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.183e-1583Arabidopsis thalianaAt5g40850834085UPM1 (UROPHORPHYRIN METHYLASE 1)Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine.---C.G.S.X.
0.022e-138Glycine maxHgAffx.5936.1.S1_atCB826275--2e+1At5g30490-C.G.S.X.
0.302e-156551Hordeum vulgareContig10779_atContig10779--6e-11At5g40850UPM1 (UROPHORPHYRIN METHYLASE 1)C.G.S.X.
0.083e-1687Populus trichocarpaPtpAffx.216621.1.S1_atpmrna31524hypothetical protein-1e-56At5g40850UPM1 (UROPHORPHYRIN METHYLASE 1)C.G.S.X.
0.232e-72274Triticum aestivumTa.16497.1.S1_atCA607295--4e-3At5g40850UPM1 (UROPHORPHYRIN METHYLASE 1)C.G.S.X.
0.033e+032Vitis vinifera1616131_atCB973358similar to Os01g0104000-1e+0At1g11470-C.G.S.X.
0.252e-131468Zea maysZm.131.1.A1_atD83391.1siroheme uroporphyrinogen methyltransferase1-1e-3At5g40850UPM1 (UROPHORPHYRIN METHYLASE 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0008152The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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