CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0628900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0628900 AK060213.1 - - 4e+0 At5g06070 RBE (RABBIT EARS) S.X. H.G.
0.60 79.7 Os04g0632600 AF403129.1 - - 1e-3 At4g23150 protein kinase family protein S.X. H.G.
0.08 4.2 Os02g0156800 AK067358.1 - - 7e-2 At5g61240 protein binding S.X. H.G.
0.07 3.7 Os03g0285100 AK071764.1 - Conserved hypothetical protein 7e-1 At3g10520 AHB2 (ARABIDOPSIS HAEMOGLOBIN 2) S.X. H.G.
0.03 1.4 Os01g0115800 AK120293.1 - Protein kinase domain containing protein 2e-2 At4g21230 protein kinase family protein S.X. H.G.
0.01 0.5 Os06g0474600 9634.m02674 - - 1e+0 At1g29720 protein kinase family protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
57.1 99.9 GSM159185 Y Leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
25.4 99.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.2 99.3 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.7 99.2 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.6 99.1 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.2 98.9 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.7 98.9 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.6 98.9 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.5 98.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.5 98.9 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 2e-9 65 Os01g0627600 AK101667.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-2 At3g14630 CYP72A9 C.G. S.X.
0.13 2e-15 85 Os01g0627800 AK101750.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-6 At3g14660 CYP72A13 C.G. S.X.
0.11 8e-15 83 Os01g0627400 AK074025.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 4e+0 At3g14630 CYP72A9 C.G. S.X.
0.11 3e-11 71 Os01g0602400 AK107349.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 6e-2 At3g14650 CYP72A11 C.G. S.X.
0.09 9e-18 93 Os01g0628000 AK109274.1 - Cytochrome P450 family protein 4e-1 At1g54410 dehydrin family protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e+0 34 Arabidopsis thaliana At5g06070 830494 RBE (RABBIT EARS) Isolated as a mutation defective in petal development with specific effects on adaxial petals which are filamentous or absent. Encodes a Superman (SUP) like protein with zinc finger motifs. Transcript is detected in petal primordia and protein is localized to the nucleus. - - - C.G. S.X.
0.03 5e-3 44 Glycine max GmaAffx.24227.1.S1_at BQ298345 - - 5e-7 At3g14640 CYP72A10 C.G. S.X.
0.22 7e-40 165 Hordeum vulgare Contig17284_at Contig17284 - - 6e-2 At3g14650 CYP72A11 C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.133870.1.A1_at CV258749 cytochrome P450 - 6e-1 At2g28370 - C.G. S.X.
0.23 1e-30 135 Triticum aestivum Ta.8399.1.S1_at BQ161842 - - 1e-3 At3g14650 CYP72A11 C.G. S.X.
0.04 3e-1 36 Vitis vinifera 1614070_at CF214262 hypothetical protein LOC100247788 - 4e-3 At3g14630 CYP72A9 C.G. S.X.
0.22 1e-16 87 Zea mays Zm.1555.1.A1_at BM347846 - - 2e-4 At3g14660 CYP72A13 C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage