CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0627400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 82.7 Os01g0627400 AK074025.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 4e+0 At3g14630 CYP72A9 S.X. H.G.
0.91 98.9 Os10g0528400 AF309379.1 - Glutathione S-transferase, C-terminal domaincontaining protein 1e-1 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) S.X. H.G.
0.77 93.1 Os03g0154000 AK103088.1 - Aromatic-ring hydroxylase family protein 3e+0 At3g13882 structural constituent of ribosome S.X. H.G.
0.67 87.2 Os10g0528300 AF309378.1 - Tau class GST protein 4 2e-4 At3g43800 ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27) S.X. H.G.
0.61 81.2 Os03g0283200 AF237487.2 - IN2-1 protein 2e+0 At5g02780 In2-1 protein, putative S.X. H.G.
0.61 81.2 Os10g0530900 AF309376.1 - Glutathione S-transferase GST 30 (EC 2.5.1.18) 2e+0 At1g18680 HNH endonuclease domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.3 99.7 GSM100442 Rice Azucena 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
30.4 99.7 GSM100441 Rice Azucena 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
30.1 99.7 GSM149410 Rice Azucena 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
29.4 99.7 GSM100446 Rice Bala 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
19.6 99.1 GSM100445 Rice Bala 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
17.9 98.9 GSM149412 Rice Bala 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
11.5 98.2 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
7.1 97.4 GSM275411 Azucena root tip_Buckled at the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
7.1 97.4 GSM159173 Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
6.8 97.3 GSM275413 Azucena root tip_Buckled at the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 9e-15 83 Os01g0628900 AK060213.1 - - 4e+0 At5g06070 RBE (RABBIT EARS) C.G. S.X.
0.10 2e-19 99 Os01g0627600 AK101667.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-2 At3g14630 CYP72A9 C.G. S.X.
0.07 2e-15 85 Os01g0627800 AK101750.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-6 At3g14660 CYP72A13 C.G. S.X.
0.07 1e-13 79 Os05g0372300 AK120018.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-3 At3g14630 CYP72A9 C.G. S.X.
0.06 6e-16 87 Os07g0647200 9635.m04549 - Cytochrome P450 family protein 1e-2 At2g26710 BAS1 (PHYB ACTIVATION TAGGED SUPPRESSOR 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e+0 34 Arabidopsis thaliana At3g14630 820691 CYP72A9 putative cytochrome P450 - - - C.G. S.X.
0.02 3e-1 38 Glycine max HgAffx.11791.1.S1_at CB377882 - - 4e-1 At3g09700 DNAJ heat shock N-terminal domain-containing protein C.G. S.X.
0.38 9e-89 327 Hordeum vulgare Contig15063_at Contig15063 - - 2e+0 At4g13690 unknown protein C.G. S.X.
0.02 3e-1 38 Populus trichocarpa PtpAffx.220967.1.S1_at pmrna37473 hypothetical protein - 1e+1 At3g32180 unknown protein C.G. S.X.
0.25 4e-37 157 Triticum aestivum TaAffx.43688.1.S1_at BF200060 - - 6e+0 At4g36791 unknown protein C.G. S.X.
0.04 5e-6 52 Vitis vinifera 1619578_at CB342051 hypothetical protein LOC100254366 /// hypothetical protein LOC100258319 /// hypothetical protein LOC100267392 - 6e-3 At3g14620 CYP72A8 C.G. S.X.
0.48 1e-84 313 Zea mays Zm.8042.1.A1_at CA404475 hypothetical protein LOC100217161 - 2e-1 At2g46960 CYP709B1 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0022900 A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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