Gene omics information

Query gene ID Os01g0623200
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.98100.0Os01g0623200CB668440-C4-dicarboxylate transporter/malic acid transportprotein family protein8e-11At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)S.X.H.G.
0.3032.7Os04g0640900AK062582.1-Conserved hypothetical protein8e-8At5g64550loricrin-relatedS.X.H.G.
0.2321.2Os02g0690200AK070868.1-Conserved hypothetical protein4e-1At4g31150endonuclease V family proteinS.X.H.G.
0.2016.5Os12g0596800AK065760.1-Ubiquitin interacting motif domain containingprotein1e-12At4g36860zinc ion bindingS.X.H.G.
0.1915.1Os07g0569700AK062388.1-Zn-finger, C2H2 type domain containing protein3e-1At5g09270unknown proteinS.X.H.G.
0.1915.1Os02g0165000AK069562.1-Zn-finger, RING domain containing protein7e-5At3g09760zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.1813.7Os11g0703400AB117996.1-Snf7 family protein2e-19At2g06530VPS2.1S.X.H.G.
0.1712.6Os02g0118200AK111716.1-Protein kinase8e-4At4g35600CONNEXIN 32S.X.H.G.
0.1712.6Os03g0809100AK070392.1-Major facilitator superfamily protein2e-11At4g36790transporter-relatedS.X.H.G.
0.1712.6Os03g0326000AK059185.1-Phospholipid-transporting ATPase 1 (EC 3.6.3.1)(Aminophospholipid flippase 1)7e+0At3g61678unknown proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
50.399.9GSM173091Rice OsSRT1 RNAi transgenic line LM1GSE7197Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
42.799.9GSM159184Y Leaf, biological rep 2GSE6893Expression data for reproductive development in rice
18.899.0GSM173086Rice MH63 Control1GSE7197Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
10.898.1GSM173094Rice OsSRT1 RNAi transgenic line LM3GSE7197Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
9.998.0GSM173080Rice MH63 Control2GSE7197Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
9.898.0GSM173093Rice OsSRT1 RNAi transgenic line LM2GSE7197Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
7.897.6GSM159185Y Leaf, biological rep 3GSE6893Expression data for reproductive development in rice
6.497.2GSM100444Rice Bala 0ppm Arsenate (Control) Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
5.496.8GSM431932Root- -Fe-P biological rep2GSE17245Transcriptome analysis of iron and phosphorus interaction in rice seedlings
5.196.6GSM100439Rice Azucena 0ppm Arsenate (Control) Rep1GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.480862Os05g0584900AK105309.1-Conserved hypothetical protein5e-3At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)C.G.S.X.
0.343e-95351Os05g0219900AK120886.1-Conserved hypothetical protein3e-4At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)C.G.S.X.
0.282e-151537Os01g0226600AK121458.1-C4-dicarboxylate transporter/malic acid transportprotein family protein2e-5At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)C.G.S.X.
0.281e-103379Os01g0385400AK064337.1-C4-dicarboxylate transporter/malic acid transportprotein family protein3e-7At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)C.G.S.X.
0.181e-45186Os07g0181100AK109854.1-C4-dicarboxylate transporter/malic acid transportprotein family protein7e-2At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)C.G.S.X.
0.142e-1689Os04g0574700AK060520.1--2e-2At1g12480OZS1 (OZONE-SENSITIVE 1)C.G.S.X.
0.047e-1687Os11g02741009639.m01594-Protein kinase domain containing protein3e-1At3g60580zinc finger (C2H2 type) family proteinC.G.S.X.
0.041e-863Os02g0530100AF198626.1-Copper chaperone homolog CCH2e-9At3g56240CCH (COPPER CHAPERONE)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.118e-1169Arabidopsis thalianaAt5g24030832468SLAH3 (SLAC1 HOMOLOGUE 3)Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.---C.G.S.X.
0.014e-138Glycine maxPsAffx.C313000010_atPsAffx.C313000010--1e+0At5g61620myb family transcription factorC.G.S.X.
0.064e-859Hordeum vulgareHI01L19w_atHI01L19w--4e+0At4g33360terpene cyclase/mutase-relatedC.G.S.X.
0.031e-450Populus trichocarpaPtp.3718.1.S1_atDN491471--2e-6At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)C.G.S.X.
0.112e-21105Triticum aestivumTaAffx.65288.1.A1_atBJ252359--3e-7At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)C.G.S.X.
0.012e-240Vitis vinifera1613978_atBQ797143hypothetical protein LOC100253526-1e+0At2g40080ELF4 (EARLY FLOWERING 4)C.G.S.X.
0.233e-82305Zea maysZm.18455.1.A1_atCO531054C4-dicarboxylate transporter/malic acid transport protein-2e-3At5g24030SLAH3 (SLAC1 HOMOLOGUE 3)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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