CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0618400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os01g0618400 NM_192814.1 - RNA helicase (Fragment) 2e-20 At5g63630 DEAD box RNA helicase, putative S.X. H.G.
0.83 95.8 Os03g0736400 AK105812.1 - Conserved hypothetical protein 95 family protein 1e-24 At3g28460 unknown protein S.X. H.G.
0.73 91.1 Os08g0345400 AK065348.1 - Conserved hypothetical protein 1e-2 At2g04360 unknown protein S.X. H.G.
0.67 87.2 Os07g0510100 AK066776.1 - Methionine aminopeptidase-like protein 3e-19 At1g13270 MAP1C (METHIONINE AMINOPEPTIDASE 1B) S.X. H.G.
0.60 79.7 Os03g0656900 AK066416.1 - NusB/RsmB/TIM44 domain containing protein 3e-9 At4g26370 antitermination NusB domain-containing protein S.X. H.G.
0.47 62.3 Os01g0558800 AK068120.1 - Conserved hypothetical protein 8e-1 At5g19300 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
17.4 98.9 GSM207560 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
16.4 98.8 GSM207559 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
14.3 98.6 GSM207562 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
13.7 98.5 GSM207564 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
12.8 98.4 GSM207563 Mudanjiang8 OsWRKY13 Overexpressing D11UM7-2 rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
12.6 98.4 GSM207558 Mudanjiang8 OsWRKY13 Overexpressing D11UM1-1 rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
11.8 98.3 GSM207565 Mudanjiang8 wild type control rep1 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
11.5 98.2 GSM207566 Mudanjiang8 wild type control rep2 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
10.7 98.1 GSM207567 Mudanjiang8 wild type control rep3 GSE8380 Rice Gene Network Inferred from Expression Profiling of Plants Overexpressing OsWRKY13
10.6 98.1 GSM421695 XOO, 8 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.58 0 728 Os01g0618500 AK067476.1 - RNA helicase (Fragment) 1e-18 At5g08620 STRS2 (STRESS RESPONSE SUPPRESSOR 2) C.G. S.X.
0.02 2e-3 46 Os07g0301200 AK102570.1 - Helicase, C-terminal domain containing protein 2e-8 At1g31970 STRS1 (STRESS RESPONSE SUPPRESSOR 1) C.G. S.X.
0.02 7e-3 44 Os08g0135600 9636.m00337 - Conserved hypothetical protein 2e+0 At4g16750 DRE-binding transcription factor, putative C.G. S.X.
0.01 2e-3 46 Os01g0172200 AK100326.1 - WW/Rsp5/WWP domain containing protein 1e-7 At3g01540 DRH1 (DEAD BOX RNA HELICASE 1) C.G. S.X.
0.01 3e-2 42 Os03g0308500 CB639253 - DEAD/DEAH box helicase, N-terminal domaincontaining protein 5e-7 At2g47330 DEAD/DEAH box helicase, putative C.G. S.X.
0.01 3e-2 42 Os12g0481100 AK073151.1 - RNA helicase 3e-1 At4g16630 DEAD/DEAH box helicase, putative (RH28) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 2e-20 101 Arabidopsis thaliana At5g63630 836483 DEAD box RNA helicase, putative F:helicase activity, ATP binding, ATP-dependent helicase activity, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAV - - - C.G. S.X.
0.23 1e-16 89 Glycine max Gma.8714.1.S1_at CD407962 - - 8e-35 At5g63630 DEAD box RNA helicase, putative C.G. S.X.
0.02 4e-1 36 Hordeum vulgare Contig23823_at Contig23823 - - 1e+0 At1g23420 INO (INNER NO OUTER) C.G. S.X.
0.07 9e-17 89 Populus trichocarpa Ptp.1107.1.A1_at CV241174 hypothetical protein - 4e-17 At5g63630 DEAD box RNA helicase, putative C.G. S.X.
0.14 8e-26 119 Triticum aestivum Ta.7013.1.S1_at CD453682 - - 2e+0 At1g14630 unknown protein C.G. S.X.
0.02 7e-2 38 Vitis vinifera 1614351_at BQ795124 - - 1e-13 At3g53110 LOS4 (LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4) C.G. S.X.
0.01 2e+0 34 Zea mays Zm.2176.1.S1_at AY111425.1 - - 4e+0 At1g54215 proline-rich family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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