Gene omics information

Query gene ID Os01g0613900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6382.7Os01g0613900AK119181.1-Protein of unknown function UPF0052 and CofDfamily protein1e-15At2g34090MEE18 (maternal effect embryo arrest 18)S.X.H.G.
0.6787.2Os04g0626700AK106652.1-Conserved hypothetical protein1e+0At4g02260RSH1 (RELA-SPOT HOMOLOG 1)S.X.H.G.
0.6181.2Os09g0383400AK103385.1-Helicase, C-terminal domain containing protein9e-5At1g59990DEAD/DEAH box helicase, putative (RH22)S.X.H.G.
0.5978.0Os06g0283200AK073829.1-Zn-finger-like, PHD finger domain containingprotein1e+0At1g08110lactoylglutathione lyase, putative / glyoxalase I, putativeS.X.H.G.
0.3644.0Os10g0477200AK067154.1-TPR-like domain containing protein6e-3At3g21470pentatricopeptide (PPR) repeat-containing proteinS.X.H.G.
0.2117.9Os02g0597800AK072807.1--1e+0At5g23250succinyl-CoA ligase (GDP-forming) alpha-chain, mitochondrial, putative / succinyl-CoA synthetase, alpha chain, putative / SCS-alpha, putativeS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.899.5GSM377075Genomic DNA - 45 day old leaf sample - mutant g650GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.999.2GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.699.1GSM377072Genomic DNA - 45 day old leaf sample - mutant d1137GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.299.0GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.199.0GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.999.0GSM377073Genomic DNA - 45 day old leaf sample - mutant d2943GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.198.9GSM377077Genomic DNA - 45 day old leaf sample - mutant g6489GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.798.9GSM377084Genomic DNA - 45 day old leaf sample - mutant f1856GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.698.9GSM377071Genomic DNA - 45 day old leaf sample - mutant d256GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.298.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e-240Os03g0339300AK061545.1-Peroxidase (EC 1.11.1.7)5e-1At1g14550anionic peroxidase, putativeC.G.S.X.
0.021e-140Os03g01590009631.m00557-Proteinase inhibitor I9, subtilisin propeptidedomain containing protein2e+0At4g36040DNAJ heat shock N-terminal domain-containing protein (J11)C.G.S.X.
0.024e-138Os06g02647009634.m01542-Acylphosphatase domain containing protein4e+0At1g49850zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.021e+036Os08g04519009636.m03522-Zn-finger, cysteine-rich C6HC domain containingprotein5e+0At1g65620AS2 (ASYMMETRIC LEAVES 2)C.G.S.X.
0.012e-140Os03g0427000AK069737.1-Conserved hypothetical protein2e-1At4g36060basic helix-loop-helix (bHLH) family proteinC.G.S.X.
0.013e-138Os02g0450000AK122096.1-Conserved hypothetical protein1e-1At2g36710pectinesterase family proteinC.G.S.X.
0.013e-138Os05g0469600U07339.1-Pyruvate decarboxylase isozyme 1 (EC 4.1.1.1)(PDC)1e-15At5g01330PDC3 (pyruvate decarboxylase-3)C.G.S.X.
0.014e-138Os01g0969700AK071720.1-Conserved hypothetical protein2e+0At4g32590ferredoxin-relatedC.G.S.X.
0.014e-138Os05g0351500AK108857.1-Hypothetical protein2e+0At5g47110lil3 protein, putativeC.G.S.X.
0.011e+036Os03g0853700AK069032.1-Conserved hypothetical protein1e-7At5g08550ILP1 (increased level of polyploidy1-1D)C.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.201e-1585Arabidopsis thalianaAt2g34090817970MEE18 (maternal effect embryo arrest 18)F:molecular_function unknown;P:embryonic development ending in seed dormancy, pollen tube development;C:cellular_component unknown;BOFPV---C.G.S.X.
0.025e-344Glycine maxGma.3464.2.S1_atCA799509--1e+0At5g18540unknown proteinC.G.S.X.
0.5401152Hordeum vulgareContig12756_atContig12756--1e-21At2g34090MEE18 (maternal effect embryo arrest 18)C.G.S.X.
0.033e-138Populus trichocarpaPtpAffx.29024.1.S1_atDN491934--5e+0At5g03520ATRAB8CC.G.S.X.
0.022e-138Triticum aestivumTaAffx.78252.1.S1_atCA735322--3e+0At3g33528unknown proteinC.G.S.X.
0.021e-240Vitis vinifera1609815_atBQ798206hypothetical protein LOC100241283-6e+0At5g07520GRP18 (GLYCINE-RICH PROTEIN 18)C.G.S.X.
0.021e+034Zea maysZm.8600.1.A1_atAY107085.1--6e-2At5g52200unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage