CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0607100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 82.7 Os01g0607100 9629.m04043 - - 3e-1 At2g36100 integral membrane family protein S.X. H.G.
0.42 53.9 Os03g0675700 9631.m04590 - Conserved hypothetical protein 9e-2 At4g38860 auxin-responsive protein, putative S.X. H.G.
0.38 46.9 Os09g0462300 9637.m02532 - Esterase/lipase/thioesterase domain containingprotein 3e+0 At5g16200 50S ribosomal protein-related S.X. H.G.
0.38 46.9 Os01g0167100 AK072599.1 - Hypothetical protein 6e-1 At5g28050 cytidine/deoxycytidylate deaminase family protein S.X. H.G.
0.33 38.8 Os06g0115200 NM_185430.1 - WD40-like domain containing protein 4e+0 At4g17500 ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1) S.X. H.G.
0.24 22.4 Os04g0464600 AK105634.1 - Zn-finger, C2H2 type domain containing protein 2e-1 At5g47220 ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2) S.X. H.G.
0.23 21.2 Os01g0202800 NM_188316.1 - Major intrinsic protein 9e-2 At4g18910 NIP1 S.X. H.G.
0.23 21.2 Os07g0124000 9635.m00230 - Conserved hypothetical protein 2e-3 At2g30560 glycine-rich protein S.X. H.G.
0.22 19.4 Os02g0592700 AK108162.1 - Conserved hypothetical protein 3e+0 At1g31335 unknown protein S.X. H.G.
0.21 17.9 Os06g0222800 AK101914.1 - Metallophosphoesterase domain containing protein 5e+0 At3g61180 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
43.3 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.0 99.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.4 99.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.3 99.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.1 99.2 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.4 99.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.1 98.9 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.9 98.8 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 5e-57 222 Os01g0347900 9629.m02377 - - 9e-1 At5g43680 unknown protein C.G. S.X.
0.04 4e-2 40 Os12g0508100 9640.m03140 - Acrosin precursor (EC 3.4.21.10) (53 kDafucose-binding protein) 3e+0 At3g25577 unknown protein C.G. S.X.
0.03 4e-2 40 Os08g0564500 9636.m04594 - Zn-finger, U1-like domain containing protein 1e-3 At2g36930 zinc finger (C2H2 type) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-1 36 Arabidopsis thaliana At2g36100 818183 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.04 3e-2 40 Glycine max GmaAffx.20258.1.S1_at CA937564 - - 9e-4 At1g26220 GCN5-related N-acetyltransferase (GNAT) family protein C.G. S.X.
0.03 6e-1 34 Hordeum vulgare HVSMEm0012I10r2_x_at HVSMEm0012I10r2 - - 3e+0 At3g03890 FMN binding C.G. S.X.
0.04 5e-1 36 Populus trichocarpa PtpAffx.5122.6.A1_at CV272959 hypothetical protein - 7e-5 At5g24510 60s acidic ribosomal protein P1, putative C.G. S.X.
0.03 9e-2 38 Triticum aestivum Ta.9783.3.S1_x_at BJ285979 - - 4e+0 At2g21465 - C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1618584_at CD720161 - - 3e+0 At4g35480 RHA3B C.G. S.X.
0.03 1e-1 36 Zea mays Zm.17258.1.S1_at CK369580 - - 2e-2 At2g36100 integral membrane family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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