CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0604600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0604600 AU058134 - Conserved hypothetical protein 3e+0 At3g48675 unknown protein S.X. H.G.
0.67 87.2 Os09g0116000 9637.m00121 - - 4e+0 At5g64040 PSAN S.X. H.G.
0.61 81.2 Os10g0106300 9638.m00073 - - 1e+1 At4g24050 short-chain dehydrogenase/reductase (SDR) family protein S.X. H.G.
0.46 60.9 Os07g0688400 9638.m02651 - - 2e+0 At4g19270 unknown protein S.X. H.G.
0.28 31.1 Os02g0527700 AK069409.1 - Conserved hypothetical protein 6e-1 At2g23340 AP2 domain-containing transcription factor, putative S.X. H.G.
0.27 27.5 Os01g0839000 NM_190518.1 - - 3e-1 At2g26120 glycine-rich protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
48.8 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
27.5 99.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.1 99.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.6 99.4 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.4 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.1 99.3 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.0 99.3 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
22.7 99.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.7 99.2 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.5 99.2 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 1e-38 161 Os12g0553100 9640.m03557 - - 5e+0 At4g01670 unknown protein C.G. S.X.
0.13 2e-10 67 Os10g0318900 AK111448.1 - Conserved hypothetical protein 2e-4 At1g09740 ethylene-responsive protein, putative C.G. S.X.
0.09 8e-28 125 Os04g0581600 AK101692.1 - The start codon is not identified. 3e-3 At3g29360 UDP-glucose 6-dehydrogenase, putative C.G. S.X.
0.09 5e-23 109 Os11g0615400 9633.m00900 - - 3e+0 At4g00390 transcription regulator C.G. S.X.
0.02 6e-4 46 Os04g0118100 BI811805 - Amidase family protein 4e+0 At3g61430 PIP1A (PLASMA MEMBRANE INTRINSIC PROTEIN 1A) C.G. S.X.
0.02 3e-1 36 Os01g0923900 AA753964 - Cyclin-like F-box domain containing protein 5e+0 At3g12930 - C.G. S.X.
0.01 3e-1 36 Os02g0566300 AK073899.1 - Conserved hypothetical protein 5e-1 At1g50760 unknown protein C.G. S.X.
0.01 1e+0 34 Os07g0575900 AK105640.1 - Plant protein of unknown function DUF946 familyprotein 5e+0 At4g03050 AOP3 C.G. S.X.
0.01 1e+0 34 Os11g0584100 AK069971.1 - Cyclin-like F-box domain containing protein 2e+1 At5g32597 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e+0 32 Arabidopsis thaliana At3g48675 824028 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.05 9e-1 34 Glycine max GmaAffx.53121.1.A1_at BE820032 - - 3e+0 At3g46870 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.04 1e+0 32 Hordeum vulgare HZ49L13r_at HZ49L13r - - 8e-1 At2g20619 - C.G. S.X.
0.06 4e+0 32 Populus trichocarpa PtpAffx.39726.1.S1_at CF228077 - - 2e+0 At4g14226 unknown protein C.G. S.X.
0.05 1e+1 30 Triticum aestivum TaAffx.115144.1.S1_at CA484641 - - 2e+1 At5g13050 5-FCL (5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE) C.G. S.X.
0.04 3e+0 30 Vitis vinifera 1608157_at BM437416 - - 3e-7 At4g11530 kinase C.G. S.X.
0.05 5e+0 30 Zea mays ZmAffx.987.1.A1_at AI834689 - - 8e-1 At1g55546 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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