CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0602400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.56 76.3 Os01g0602400 AK107349.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 6e-2 At3g14650 CYP72A11 S.X. H.G.
0.31 34.5 Os05g0530400 AY344492.1 - Heat shock factor protein 1 (HSF 1) (Heat shocktranscription factor 1) (HSTF 1) 1e-9 At5g03720 AT-HSFA3 S.X. H.G.
0.31 34.5 Os04g0632100 AF403127.1 - - 9e-8 At4g21370 S-locus protein kinase, putative S.X. H.G.
0.22 19.4 Os01g0155500 AK099840.1 - Resistance protein candidate (Fragment) 1e-1 At5g54380 THE1 (THESEUS1) S.X. H.G.
0.21 17.9 Os01g0728300 AK073238.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e+0 At3g14680 CYP72A14 S.X. H.G.
0.17 12.6 Os01g0558100 AK111021.1 - Glutathione S-transferase TSI-1 (EC 2.5.1.18)(Glutathione S- transferase 1) 8e-3 At5g19090 heavy-metal-associated domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
23.5 99.4 GSM174885 B FR13 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
22.5 99.3 GSM174886 F FR13 4 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
21.2 99.2 GSM174889 H FR13 4 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
21.2 99.2 GSM195225 Shoot GSE7951 Genome-wide gene expression profiling of rice stigma
18.2 98.9 GSM154947 Leaf_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
16.2 98.8 GSM154945 Leaf_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
14.6 98.6 GSM357136 14-day-old seedling, heat shock, rep 2 GSE14275 Expression data for heat shock in rice seedlings
13.9 98.5 GSM154953 Leaf_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
13.7 98.5 GSM357137 14-day-old seedling, heat shock, rep 3 GSE14275 Expression data for heat shock in rice seedlings
13.2 98.4 GSM154946 Leaf_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.67 0 672 Os01g0627900 AB038597.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 9e-4 At1g17060 CYP72C1 (CYTOCHROME P450 72C1) C.G. S.X.
0.54 0 956 Os01g0602200 BQ906060 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-1 At3g14690 CYP72A15 C.G. S.X.
0.46 6e-62 240 Os01g0627600 AK101667.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-2 At3g14630 CYP72A9 C.G. S.X.
0.15 1e-16 89 Os01g0627800 AK101750.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-6 At3g14660 CYP72A13 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 6e-2 40 Arabidopsis thaliana At3g14650 820693 CYP72A11 putative cytochrome P450 - - - C.G. S.X.
0.03 2e-2 42 Glycine max Gma.16927.1.S1_at BU547320 - - 5e-1 At3g14680 CYP72A14 C.G. S.X.
0.23 2e-24 113 Hordeum vulgare Contig20974_at Contig20974 - - 7e-6 At3g14650 CYP72A11 C.G. S.X.
0.03 8e-5 50 Populus trichocarpa PtpAffx.209960.1.S1_s_at pmrna19645 cytochrome P450 /// cytochrome P450 - 2e-4 At1g11610 CYP71A18 C.G. S.X.
0.12 3e-28 127 Triticum aestivum Ta.19609.1.S1_at AJ615628 - - 1e+1 At5g60200 Dof-type zinc finger domain-containing protein C.G. S.X.
0.04 1e-3 44 Vitis vinifera 1609184_at CB342124 hypothetical protein LOC100254366 - 7e-6 At3g14640 CYP72A10 C.G. S.X.
0.35 4e-41 169 Zea mays Zm.14316.1.S1_at AY104671.1 hypothetical protein LOC100274358 /// hypothetical protein LOC100277073 - 1e-2 At3g14630 CYP72A9 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0022900 A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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