CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0602200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 71.3 Os01g0602200 BQ906060 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-1 At3g14690 CYP72A15 S.X. H.G.
0.50 68.0 Os08g0113900 AK062376.1 - Conserved hypothetical protein 5e+0 At4g24350 phosphorylase family protein S.X. H.G.
0.47 62.3 Os01g0287400 AK058343.1 - Low-temperature induced protein lt101.2 3e-1 At4g28088 hydrophobic protein, putative / low temperature and salt responsive protein, putative S.X. H.G.
0.16 11.3 Os01g0754800 AK108976.1 - Conserved hypothetical protein 2e+0 At2g20590 reticulon family protein S.X. H.G.
0.11 6.5 Os08g0562300 AK063290.1 - Zn-finger, C2H2 type domain containing protein 7e-4 At5g22890 zinc finger (C2H2 type) family protein S.X. H.G.
0.10 5.7 Os03g0564600 AK108950.1 - Protein of unknown function DUF26 domaincontaining protein 7e+0 At2g26120 glycine-rich protein S.X. H.G.
0.07 3.7 Os09g0394600 AK065379.1 - Endonuclease/exonuclease/phosphatase familyprotein 1e-2 At3g63240 endonuclease/exonuclease/phosphatase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
45.7 99.9 GSM100443 Rice Bala 0ppm Arsenate (Control) Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
43.6 99.9 GSM100440 Rice Azucena 0ppm Arsenate (Control) Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
40.3 99.9 GSM100439 Rice Azucena 0ppm Arsenate (Control) Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
34.2 99.8 GSM100444 Rice Bala 0ppm Arsenate (Control) Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
14.0 98.5 GSM149410 Rice Azucena 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
13.6 98.5 GSM149409 Rice Azucena 0ppm Arsenate (Control) Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
11.4 98.2 GSM304669 Control for the stable mutant rice line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
11.3 98.2 GSM100445 Rice Bala 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
8.6 97.8 GSM159210 Seed (S2, 3 - 4 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
8.4 97.7 GSM304664 Control for the stable mutant rice line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.55 0 958 Os01g0602400 AK107349.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 6e-2 At3g14650 CYP72A11 C.G. S.X.
0.44 3e-87 323 Os01g0627900 AB038597.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 9e-4 At1g17060 CYP72C1 (CYTOCHROME P450 72C1) C.G. S.X.
0.26 2e-17 91 Os01g0627600 AK101667.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-2 At3g14630 CYP72A9 C.G. S.X.
0.09 1e-9 65 Os01g0628900 AK060213.1 - - 4e+0 At5g06070 RBE (RABBIT EARS) C.G. S.X.
0.06 5e-9 63 Os01g0627800 AK101750.1 - Cytochrome P450 monooxygenase CYP72A5 (Fragment) 1e-6 At3g14660 CYP72A13 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e-1 38 Arabidopsis thaliana At3g14690 820697 CYP72A15 putative cytochrome P450 - - - C.G. S.X.
0.04 8e-4 46 Glycine max Gma.4030.1.S1_at CD414923 - - 1e-1 At4g39510 CYP96A12 C.G. S.X.
0.20 3e-35 149 Hordeum vulgare HVSMEa0013F14r2_at HVSMEa0013F14r2 - - 8e-5 At3g14680 CYP72A14 C.G. S.X.
0.02 2e-1 38 Populus trichocarpa Ptp.5967.1.S1_at CK106754 - - 6e-6 At2g20560 DNAJ heat shock family protein C.G. S.X.
0.19 1e-35 151 Triticum aestivum Ta.19609.1.S1_at AJ615628 - - 1e+1 At5g60200 Dof-type zinc finger domain-containing protein C.G. S.X.
0.02 6e-1 34 Vitis vinifera 1617051_at CF210616 hypothetical protein LOC100255590 - 2e-1 At2g23220 CYP81D6 C.G. S.X.
0.14 2e-26 119 Zea mays Zm.14316.1.S1_at AY104671.1 hypothetical protein LOC100274358 /// hypothetical protein LOC100277073 - 1e-2 At3g14630 CYP72A9 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0022900 A process whereby a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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