CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0593100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.86 96.4 Os01g0593100 NM_192598.1 - Hypothetical protein 2e+0 At1g43330 myb family protein-related S.X. H.G.
0.73 91.1 Os07g0456000 9635.m02632 - - 1e+0 At4g27150 2S seed storage protein 2 / 2S albumin storage protein / NWMU2-2S albumin 2 S.X. H.G.
0.63 82.7 Os05g0439750 9633.m03398 - - 1e-2 At2g41380 embryo-abundant protein-related S.X. H.G.
0.60 79.7 Os06g0528000 NM_196265.1 - - 1e+0 At5g52570 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2) S.X. H.G.
0.52 69.6 Os08g0295201 9636.m01953 - - 3e+0 At1g24577 unknown protein S.X. H.G.
0.48 63.7 Os08g0479900 9636.m03757 - - 3e+0 At5g58710 ROC7 S.X. H.G.
0.43 55.4 Os09g0259366 9637.m00619 - - 6e+0 At5g60400 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
113.7 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
85.9 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
21.8 99.2 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.6 99.1 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.3 99.0 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.7 98.9 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.2 98.8 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.9 98.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.7 98.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.4 98.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.37 1e-95 351 Os07g0586000 C27412 - Hypothetical protein 1e-1 At5g52360 ADF10 (ACTIN DEPOLYMERIZING FACTOR 10) C.G. S.X.
0.06 2e-11 71 Os05g0493900 9633.m03962 - - 4e-1 At1g04445 zinc finger (C2H2 type) family protein C.G. S.X.
0.03 2e-5 52 Os01g0975601 NM_189495.1 - - 7e-1 At4g30670 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At1g43330 840934 myb family protein-related F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;MOPFV - - - C.G. S.X.
0.02 3e-3 44 Glycine max GmaAffx.5977.1.S1_at BU548613 - - 6e+0 At5g03545 unknown protein C.G. S.X.
0.26 1e-37 157 Hordeum vulgare Contig14227_at Contig14227 - - 7e-1 At2g30810 gibberellin-regulated family protein C.G. S.X.
0.03 3e+0 34 Populus trichocarpa PtpAffx.160409.1.A1_at CV235012 - - 2e+0 At5g50110 - C.G. S.X.
0.23 1e-32 141 Triticum aestivum Ta.6435.1.S1_a_at CK195702 - - 8e-1 At2g30810 gibberellin-regulated family protein C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1622359_at CK136964.1 - - 3e-1 At4g27310 zinc finger (B-box type) family protein C.G. S.X.
0.18 8e-29 127 Zea mays Zm.5867.2.S1_at AY104476.1 ZCW7 - 1e+1 At4g19645 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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