CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0592600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os01g0592600 NM_192593.1 - - 5e-1 At2g18410 unknown protein S.X. H.G.
0.67 87.2 Os07g0203000 9635.m00998 - - 4e-1 At5g10750 unknown protein S.X. H.G.
0.67 87.2 Os08g0184900 9636.m00813 - - 2e-2 At4g00130 - S.X. H.G.
0.63 82.7 Os01g0651600 NM_192378.1 - - 3e-1 At5g18920 unknown protein S.X. H.G.
0.61 81.2 Os04g0384433 9632.m03000 - - 3e+0 At5g36080 unknown protein S.X. H.G.
0.57 77.0 Os01g0746000 9629.m05287 - - 7e-2 At1g61930 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
52.1 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.7 99.6 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
25.3 99.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.4 99.4 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.9 99.4 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.0 99.3 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.4 99.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.4 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.8 99.2 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.8 99.2 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.30 1e-106 387 Os01g0592500 AK111253.1 - Protein of unknown function DUF1070 family protein 1e+0 At2g11005 glycine-rich protein C.G. S.X.
0.23 2e-63 244 Os01g0700100 AK059965.1 - MtN3 and saliva related transmembrane proteinfamily protein 4e-2 At3g53420 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A) C.G. S.X.
0.04 6e-8 59 Os08g0380100 AK101838.1 - Polygalacturonase isoenzyme 1 beta subunitprecursor 9e-5 At1g70370 BURP domain-containing protein / polygalacturonase, putative C.G. S.X.
0.03 2e-4 48 Os03g0751600 AK105937.1 - Heavy metal transport/detoxification proteindomain containing protein 9e+0 At5g47700 60S acidic ribosomal protein P1 (RPP1C) C.G. S.X.
0.03 4e-3 44 Os06g0535601 9634.m03251 - - 4e+0 At5g61228 CPuORF15 (Conserved peptide upstream open reading frame 15) C.G. S.X.
0.01 2e-4 48 Os11g0235200 AK100802.1 - TGF-beta receptor, type I/II extracellular regionfamily protein 4e-22 At1g33440 proton-dependent oligopeptide transport (POT) family protein C.G. S.X.
0.01 1e-3 46 Os01g0911100 AK062123.1 - ATP-dependent RNA helicase-like protein 1e-17 At5g63120 ethylene-responsive DEAD box RNA helicase, putative (RH30) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 36 Arabidopsis thaliana At2g18410 816356 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOF - - - C.G. S.X.
0.03 4e-2 40 Glycine max GmaAffx.74863.2.S1_at AW756212 - - 1e-5 At2g19480 NAP1 C.G. S.X.
0.19 1e-52 206 Hordeum vulgare Contig6816_at Contig6816 - - 2e+0 At4g13640 UNE16 (unfertilized embryo sac 16) C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.215461.1.S1_at pmrna29670 hypothetical protein - 4e-1 At1g48780 unknown protein C.G. S.X.
0.19 1e-35 151 Triticum aestivum TaAffx.27215.1.A1_at CK212499 - - 2e+0 At5g11440 CID5 C.G. S.X.
0.02 6e-1 34 Vitis vinifera 1607578_at CF415519 hypothetical protein LOC100247175 - 1e+0 At5g57000 unknown protein C.G. S.X.
0.09 3e-6 52 Zea mays Zm.12522.1.A1_at AW018145 hypothetical protein LOC100279636 - 6e-1 At5g53190 nodulin MtN3 family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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