CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0588500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.71 89.6 Os01g0588500 AK103037.1 - Protein kinase APK1A (EC 2.7.1.-) 3e-60 At3g01300 protein kinase, putative S.X. H.G.
0.40 51.1 Os03g0302700 AK112010.1 - Zn-finger, RING domain containing protein 1e-1 At3g05870 APC11 S.X. H.G.
0.23 21.2 Os09g0361700 AK063109.1 - Protein of unknown function UPF0203 family protein 3e-3 At3g22070 proline-rich family protein S.X. H.G.
0.14 9.3 Os12g0639700 AK069880.1 - - 5e-8 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein S.X. H.G.
0.11 6.5 Os02g0698100 AK060614.1 - Conserved hypothetical protein 7e-1 At1g78410 VQ motif-containing protein S.X. H.G.
0.04 2.0 Os03g0740600 AK101589.1 - Deoxyhypusine synthase (EC 2.5.1.46) 1e-15 At5g05920 DHS (DEOXYHYPUSINE SYNTHASE) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.1 98.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.7 98.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.5 98.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.5 98.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.6 98.2 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.2 98.2 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.5 97.9 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.4 97.9 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.4 97.9 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.3 97.9 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.39 2e-124 448 Os09g0361100 AK064216.1 - Protein kinase APK1A (EC 2.7.1.-) 1e-70 At5g15080 protein kinase, putative C.G. S.X.
0.15 5e-11 71 Os03g0821900 AK070847.1 - Protein kinase domain containing protein 3e-38 At1g07570 APK1A C.G. S.X.
0.14 1e-20 103 Os06g0168800 AK111753.1 - Protein kinase 3e-22 At5g15080 protein kinase, putative C.G. S.X.
0.08 2e-16 89 Os11g0121400 AK102267.1 - Avr9/Cf-9 rapidly elicited protein 264 9e-35 At5g01020 protein kinase family protein C.G. S.X.
0.04 7e-13 77 Os06g0663200 AK100479.1 - Protein kinase APK1A (EC 2.7.1.-) 3e-10 At3g28690 protein kinase, putative C.G. S.X.
0.02 7e-10 67 Os03g0274800 AK102905.1 - Protein kinase APK1A (EC 2.7.1.-) 1e-6 At2g28930 APK1B C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.26 3e-60 234 Arabidopsis thaliana At3g01300 820989 protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA - - - C.G. S.X.
0.21 7e-77 289 Glycine max GmaAffx.8472.1.S1_at AW350979 - - 2e-40 At3g01300 protein kinase, putative C.G. S.X.
0.50 0 1291 Hordeum vulgare Contig11783_at Contig11783 - - 6e-36 At3g01300 protein kinase, putative C.G. S.X.
0.31 8e-86 319 Populus trichocarpa PtpAffx.213907.1.S1_s_at pmrna27117 hypothetical protein - 5e-54 At3g28690 protein kinase, putative C.G. S.X.
0.10 2e-11 71 Triticum aestivum Ta.12685.1.S1_at CA722001 - - 1e-1 At2g28930 APK1B C.G. S.X.
0.06 6e-3 42 Vitis vinifera 1615314_at CB008162 - - 2e-5 At3g28690 protein kinase, putative C.G. S.X.
0.25 9e-111 400 Zea mays Zm.4078.1.A1_at BM079694 protein kinase APK1A - 6e-16 At3g01300 protein kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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