CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0567200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.48 63.7 Os01g0567200 AK071488.1 - Conserved hypothetical protein 2e-1 At5g17340 unknown protein S.X. H.G.
0.40 51.1 Os06g0156700 AK120456.1 - Lipolytic enzyme, G-D-S-L family protein 6e-1 At5g66400 RAB18 (RESPONSIVE TO ABA 18) S.X. H.G.
0.29 31.1 Os10g0139300 AK107379.1 - Cyclin-like F-box domain containing protein 8e-1 At4g16750 DRE-binding transcription factor, putative S.X. H.G.
0.24 22.4 Os06g0324300 9634.m02145 - - 6e-2 At5g19640 proton-dependent oligopeptide transport (POT) family protein S.X. H.G.
0.23 21.2 Os01g0695900 D88620.1 - OSMYB4 2e-10 At3g13540 ATMYB5 (MYB DOMAIN PROTEIN 5) S.X. H.G.
0.21 17.9 Os09g0314500 9637.m01163 - RNA-binding region RNP-1 (RNA recognition motif)domain containing protein 5e-1 At5g44570 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
23.7 99.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.7 99.2 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.4 99.1 GSM281588 Rice mutant dst, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
19.8 99.1 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.6 99.1 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.9 99.0 GSM281587 Rice mutant dst, biological rep2 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
17.8 98.9 GSM159213 Seed (S3, 5 - 10 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
16.1 98.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.9 98.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.7 98.7 GSM159214 Seed (S3, 5 - 10 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.69 2e-150 533 Os03g0629800 AK071513.1 - Conserved hypothetical protein 2e+0 At4g09270 unknown protein C.G. S.X.
0.21 7e-27 123 Os08g0195400 AK070464.1 - Conserved hypothetical protein 2e+0 At5g48250 zinc finger (B-box type) family protein C.G. S.X.
0.19 2e-27 125 Os05g0343500 9633.m02527 - - 2e+0 At4g09270 unknown protein C.G. S.X.
0.16 9e-11 69 Os01g0780900 AU166580 - Conserved hypothetical protein 4e+0 At2g16190 - C.G. S.X.
0.09 2e-24 115 Os07g0115200 AK111404.1 - Conserved hypothetical protein 3e+0 At3g57500 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-1 38 Arabidopsis thaliana At5g17340 831600 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.03 4e-3 44 Glycine max GmaAffx.49497.1.S1_at BQ079518 - - 1e-2 At5g64160 unknown protein C.G. S.X.
0.02 1e+0 34 Hordeum vulgare Contig17323_at Contig17323 - - 2e-5 At1g16570 glycosyl transferase family 1 protein C.G. S.X.
0.02 2e-1 38 Populus trichocarpa Ptp.3566.1.S1_at CV228855 - - 2e-22 At4g19950 unknown protein C.G. S.X.
0.03 6e-1 36 Triticum aestivum Ta.349.2.A1_x_at CA660903 - - 9e-1 At1g54215 proline-rich family protein C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1621572_at CA811173 hypothetical protein LOC100259970 - 9e-2 At1g52191 - C.G. S.X.
0.02 1e+0 34 Zea mays Zm.9621.1.A1_at BM333959 ethylene-responsive transcription factor 3 - 4e+0 At1g69490 NAP (NAC-like, activated by AP3/PI) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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