CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0551800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 71.3 Os01g0551800 NM_193415.1 - Conserved hypothetical protein 2e-3 At5g24310 ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3) S.X. H.G.
0.77 93.1 Os02g0715000 AK060534.1 - Cysteine proteinase GP-II (EC 3.4.22.-) 4e-5 At1g20850 XCP2 (xylem cysteine peptidase 2) S.X. H.G.
0.57 77.0 Os03g0624600 AK062675.1 - No apical meristem (NAM) protein domain containingprotein 1e-2 At5g18270 ANAC087 S.X. H.G.
0.55 73.7 Os05g0355900 AK063096.1 - Hypothetical protein 4e-1 At3g12500 ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE) S.X. H.G.
0.40 51.1 Os10g0114400 9638.m00154 - Protein kinase domain containing protein 5e-10 At2g01950 BRL2 (BRI1-LIKE 2) S.X. H.G.
0.38 46.9 Os04g0491500 AK101116.1 - TGF-beta receptor, type I/II extracellular regionfamily protein 2e-2 At4g21680 proton-dependent oligopeptide transport (POT) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
30.1 99.7 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
22.9 99.3 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
21.4 99.2 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.7 99.1 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.8 98.9 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.6 98.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.4 98.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.8 98.6 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.7 98.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.6 98.5 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e-1 38 Os02g0562200 9630.m03375 - - 4e+0 At5g05120 zinc finger (C2H2 type) family protein C.G. S.X.
0.02 8e-1 36 Os09g0106700 AK066141.1 - Myb proto-oncogene protein (C-myb). Splice isoform3 1e-5 At5g67300 MYBR1 (MYB DOMAIN PROTEIN R1) C.G. S.X.
0.01 2e-1 38 Os02g0226600 AK109849.1 - POX domain containing protein 3e-4 At1g75430 BLH11 (BEL1-LIKE HOMEODOMAIN 11) C.G. S.X.
0.01 2e-1 38 Os11g0224900 9639.m01122 - NBS-LRR-like protein 2e+0 At1g33940 - C.G. S.X.
0.01 8e-1 36 Os06g0590900 9634.m03733 - - 5e-1 At2g41540 GPDHC1 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 2e-3 44 Arabidopsis thaliana At5g24310 832498 ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOFBV - - - C.G. S.X.
0.02 2e-1 38 Glycine max GmaAffx.67286.1.S1_at AW733846 - - 2e-6 At5g61810 mitochondrial substrate carrier family protein C.G. S.X.
0.58 7e-94 343 Hordeum vulgare Contig22228_at Contig22228 - - 1e-1 At5g24310 ABIL3 (ABL INTERACTOR-LIKE PROTEIN 3) C.G. S.X.
0.02 2e-1 38 Populus trichocarpa PtpAffx.40367.1.S1_at BU874775 hypothetical protein - 5e-1 At1g76010 nucleic acid binding C.G. S.X.
0.14 1e-1 38 Triticum aestivum Ta.19122.1.S1_at CA647480 - - 4e+0 At5g52240 MSBP1 (membrane steroid binding protein 1) C.G. S.X.
0.02 2e+0 32 Vitis vinifera 1613754_at CF516483 hypothetical protein LOC100243519 - 2e+0 At1g54230 DNA binding C.G. S.X.
0.11 1e-15 83 Zea mays Zm.2833.1.S1_s_at AW076206 protein ABIL1 - 2e-1 At3g53670 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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