CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0533900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0533900 AK101194.1 - Multidrug resistance protein 1 homolog 4e-4 At4g18050 PGP9 (P-GLYCOPROTEIN 9) S.X. H.G.
0.77 93.1 Os10g0122600 9638.m00247 - Cellular retinaldehyde-binding/triple function,N-terminal domain containing protein 1e-18 At4g36490 SFH12 (SEC14-LIKE 12) S.X. H.G.
0.73 91.1 Os12g0120500 AK103389.1 - Protein of unknown function DUF567 family protein 3e-2 At5g18540 unknown protein S.X. H.G.
0.60 79.7 Os07g0104400 9635.m00042 - Haem peroxidase, plant/fungal/bacterial familyprotein 2e-3 At5g40150 peroxidase, putative S.X. H.G.
0.46 60.9 Os02g0814500 9630.m05656 - Phosphate starvation regulator protein (Regulatoryprotein of P- starvation acclimation response Psr1) 5e-1 At3g13040 myb family transcription factor S.X. H.G.
0.36 44.0 Os12g0640700 AK108649.1 - N/apple PAN domain containing protein 8e-1 At5g44500 small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
21.6 99.2 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.9 99.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.9 99.1 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.8 99.0 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.3 98.9 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.3 98.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.9 98.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.5 98.6 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.8 98.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.2 98.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 2e-48 196 Os05g0548300 AK109784.1 - Multidrug resistance protein 1 homolog 2e-1 At4g18050 PGP9 (P-GLYCOPROTEIN 9) C.G. S.X.
0.11 3e-18 95 Os05g0548500 9633.m04422 - - 2e-3 At2g47000 ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4) C.G. S.X.
0.09 2e-11 73 Os01g0695700 CA766063 - Multidrug resistance protein 1 homolog 5e-7 At4g18050 PGP9 (P-GLYCOPROTEIN 9) C.G. S.X.
0.08 3e-41 173 Os02g0323000 AK064221.1 - Multidrug resistance p-glycoprotein 4e-13 At2g47000 ABCB4 (ATP BINDING CASSETTE SUBFAMILY B4) C.G. S.X.
0.05 6e-27 125 Os02g0693700 AK106518.1 - MDR-like p-glycoprotein 8e-5 At4g25960 PGP2 (P-GLYCOPROTEIN 2) C.G. S.X.
0.04 3e-25 119 Os04g0459000 AK103526.1 - MDR-like ABC transporter 2e-13 At3g28860 ABCB19 C.G. S.X.
0.04 4e-5 52 Os01g0290700 AK058263.1 - MDR-like p-glycoprotein 2e-31 At3g62150 PGP21 (P-GLYCOPROTEIN 21) C.G. S.X.
0.03 2e-29 133 Os04g0642000 AK069342.1 - ABC transporter-like protein 3e-29 At3g28860 ABCB19 C.G. S.X.
0.03 2e-11 73 Os04g0481700 AK107554.1 - ABC transporter-like protein 7e-2 At3g51260 PAD1 (20s proteasome alpha subunit pad1) C.G. S.X.
0.03 3e-3 46 Os02g0189800 9630.m00884 - ABC transporter related domain containing protein 5e-3 At3g28415 P-glycoprotein, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 1e-17 93 Arabidopsis thaliana At4g01830 826974 PGP5 (P-GLYCOPROTEIN 5) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:integral to membrane;BOMAFPV - - - C.G. S.X.
0.04 5e-2 42 Glycine max PsAffx.C100000008_at PsAffx.C100000008 - - 8e+0 At5g14140 zinc finger (C2H2 type) family protein C.G. S.X.
0.08 6e-30 133 Hordeum vulgare Contig7979_at Contig7979 - - 3e-2 At4g01820 PGP3 (P-GLYCOPROTEIN 3) C.G. S.X.
0.09 3e-9 65 Populus trichocarpa PtpAffx.218500.1.S1_at pmrna34148 multidrug/pheromone exporter, MDR family, ABC transporter family - 1e-10 At4g18050 PGP9 (P-GLYCOPROTEIN 9) C.G. S.X.
0.13 2e-87 325 Triticum aestivum TaAffx.12039.1.S1_at CA652471 - - 2e+0 At2g25697 unknown protein C.G. S.X.
0.02 4e-2 40 Vitis vinifera 1621559_at CF415172 hypothetical protein LOC100262734 - 3e-51 At3g28860 ABCB19 C.G. S.X.
0.08 5e-33 143 Zea mays Zm.14944.1.A1_at CB334702 - - 1e+0 At5g27020 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006810 The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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