CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0522800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 68.0 Os01g0522800 CB627985 - ARM repeat fold domain containing protein 2e+0 At4g10880 unknown protein S.X. H.G.
0.83 95.8 Os08g0275400 9636.m01744 - - 1e+0 At5g50740 metal ion binding S.X. H.G.
0.61 81.2 Os05g0287100 9633.m01925 - - 9e+0 At5g27541 S.X. H.G.
0.57 77.0 Os04g0265400 9632.m01771 - - 9e+0 At1g32920 unknown protein S.X. H.G.
0.57 77.0 Os11g0138225 9639.m00338 - - 1e+1 At5g16980 NADP-dependent oxidoreductase, putative S.X. H.G.
0.39 48.3 Os03g0601400 9631.m03890 - - 5e+0 At5g06470 glutaredoxin family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.1 99.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.4 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.1 99.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.0 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.0 99.5 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.9 99.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.0 99.4 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.0 99.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.6 99.4 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e-34 149 Os07g0110800 AK062792.1 - Conserved hypothetical protein 4e-1 At2g13720 ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing) C.G. S.X.
0.05 1e-32 143 Os02g0515300 AK109156.1 - Hypothetical protein 2e+0 At4g23895 pleckstrin homology (PH) domain-containing protein-related C.G. S.X.
0.05 1e-26 123 Os01g0159500 AU090656 - Hypothetical protein 9e+0 At4g14385 - C.G. S.X.
0.02 5e-3 44 Os05g0141000 9633.m00421 - ARM repeat fold domain containing protein 2e+0 At1g63980 D111/G-patch domain-containing protein C.G. S.X.
0.01 2e-6 56 Os10g0571200 AK103375.1 - Pyruvate kinase isozyme G, chloroplast (EC2.7.1.40) (Fragment) 9e-21 At5g52920 PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1) C.G. S.X.
0.01 1e+0 36 Os02g0794000 AK073661.1 - Conserved hypothetical protein 1e+0 At4g28365 plastocyanin-like domain-containing protein C.G. S.X.
0.01 5e+0 34 Os07g0640300 9639.m04076 - Nucleic acid-binding OB-fold domain containingprotein 6e-1 At4g10780 disease resistance protein (CC-NBS-LRR class), putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 34 Arabidopsis thaliana At4g10880 826687 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P - - - C.G. S.X.
0.02 3e+0 34 Glycine max HgAffx.16468.1.S1_at CB376345 - - 2e-1 At2g15345 enzyme inhibitor/ pectinesterase C.G. S.X.
0.02 1e+0 34 Hordeum vulgare HVSMEf0021D24f_s_at HVSMEf0021D24f - - 2e+0 At2g37020 DNA binding / sequence-specific DNA binding C.G. S.X.
0.02 2e-1 38 Populus trichocarpa PtpAffx.95403.1.A1_at CV247774 hypothetical protein - 2e+0 At4g17580 Bax inhibitor-1 family protein / BI-1 family protein C.G. S.X.
0.03 1e+1 32 Triticum aestivum TaAffx.106031.1.S1_at CA725615 - - 3e+0 At3g16140 PSAH-1 (photosystem I subunit H-1) C.G. S.X.
0.02 7e-1 34 Vitis vinifera 1621326_at CF606133 hypothetical protein LOC100245189 - 9e-11 At4g21200 GA2OX8 (GIBBERELLIN 2-OXIDASE 8) C.G. S.X.
0.02 4e+0 32 Zea mays ZmAffx.1100.1.A1_at AW146995 - - 4e-1 At5g01940 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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