CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0512100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os01g0512100 9629.m03073 - Altered Response to Gravity (ARG1 protein (AlteredResponse to Gravity) 32591-35072) 2e-41 At1g68370 ARG1 (ALTERED RESPONSE TO GRAVITY 1) S.X. H.G.
0.88 96.8 Os04g0196800 9632.m01077 - - 2e+0 At5g17470 calmodulin-related protein, putative S.X. H.G.
0.88 96.8 Os06g0277200 9634.m01670 - - 7e-1 At4g08260 protein phosphatase 2C, putative / PP2C, putative S.X. H.G.
0.87 96.6 Os12g0584500 9640.m03852 - - 3e+1 At5g28730 unknown protein S.X. H.G.
0.85 96.1 Os02g0491800 9630.m02768 - Germin-like protein 3 (Fragment) 6e-6 At3g04200 germin-like protein, putative S.X. H.G.
0.82 95.0 Os02g0159300 9630.m00575 - - 7e-9 At1g15270 - S.X. H.G.
0.82 95.0 Os03g0402233 9631.m02813 - - 1e-1 At1g54215 proline-rich family protein S.X. H.G.
0.81 94.8 Os09g0348600 9637.m01534 - Protein kinase domain containing protein 3e-4 At2g30740 serine/threonine protein kinase, putative S.X. H.G.
0.78 93.4 Os04g0124100 9632.m00250 - - 1e+0 At3g46890 - S.X. H.G.
0.78 93.4 Os02g0237200 9630.m01320 - - 6e+0 At3g11745 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
298.8 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
13.1 98.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.7 98.0 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.7 98.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.4 97.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.4 97.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.3 97.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.7 97.6 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
7.1 97.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.9 97.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 3e-54 214 Os03g0262500 AK071153.1 - Conserved hypothetical protein 9e-1 At4g21780 unknown protein C.G. S.X.
0.06 1e-7 59 Os02g0741100 AK071144.1 - Heat shock protein DnaJ 2e-8 At1g24120 ARL1 (ARG1-LIKE 1) C.G. S.X.
0.02 2e-9 65 Os05g0156500 AK062718.1 - Apobec-1 binding protein 2 2e-10 At3g62600 ATERDJ3B C.G. S.X.
0.02 3e-8 61 Os06g0241200 AK100783.1 - Hypothetical protein 3e-1 At1g09790 COBL6 (COBRA-LIKE PROTEIN 6 PRECURSOR) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.35 2e-41 171 Arabidopsis thaliana At1g68370 843166 ARG1 (ALTERED RESPONSE TO GRAVITY 1) DnaJ-like protein with homology to coiled coils found in cytoskeleton-interacting proteins. - - - C.G. S.X.
0.08 8e-5 50 Glycine max GmaAffx.73721.1.S1_at BU550998 - - 9e-38 At1g24120 ARL1 (ARG1-LIKE 1) C.G. S.X.
0.66 0 726 Hordeum vulgare Contig11164_at Contig11164 - - 1e-45 At1g68370 ARG1 (ALTERED RESPONSE TO GRAVITY 1) C.G. S.X.
0.40 1e-53 212 Populus trichocarpa PtpAffx.208938.1.S1_s_at pmrna17713 hypothetical protein - 9e-158 At1g68370 ARG1 (ALTERED RESPONSE TO GRAVITY 1) C.G. S.X.
0.63 0 737 Triticum aestivum Ta.5366.1.S1_at BJ217165 - - 8e-38 At1g68370 ARG1 (ALTERED RESPONSE TO GRAVITY 1) C.G. S.X.
0.06 4e-6 52 Vitis vinifera 1607209_at CB972845 hypothetical protein LOC100252578 - 5e-29 At1g68370 ARG1 (ALTERED RESPONSE TO GRAVITY 1) C.G. S.X.
0.60 0 642 Zea mays Zm.5659.1.A1_at CF623486 chaperone protein dnaJ 15 - 6e-42 At1g68370 ARG1 (ALTERED RESPONSE TO GRAVITY 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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