CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0509966

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0509966 NM_193748.1 - - 1e+0 At5g05580 FAD8 (FATTY ACID DESATURASE 8) S.X. H.G.
0.55 73.7 Os05g0126050 9633.m00277 - - 1e-2 At5g47090 unknown protein S.X. H.G.
0.50 68.0 Os02g0649150 9630.m04166 - - 5e+0 At3g17100 transcription factor S.X. H.G.
0.40 51.1 Os01g0594700 NM_192609.1 - Conserved hypothetical protein 2e-1 At1g33030 O-methyltransferase family 2 protein S.X. H.G.
0.40 51.1 Os05g0576850 9633.m04714 - - 1e-1 At2g40510 40S ribosomal protein S26 (RPS26A) S.X. H.G.
0.25 24.1 Os08g0526201 9636.m04208 - - 8e-1 At2g17710 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
264.9 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
17.7 98.9 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.1 98.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.1 98.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.6 98.1 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.3 98.1 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.0 98.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.8 98.0 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.7 97.8 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.3 97.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.74 0 1943 Os01g0509900 AK109797.1 - Cyclin-like F-box domain containing protein 1e+0 At5g05580 FAD8 (FATTY ACID DESATURASE 8) C.G. S.X.
0.05 2e-10 69 Os04g0297800 CF327907 - Conserved hypothetical protein 4e-1 At1g53460 unknown protein C.G. S.X.
0.04 3e-33 145 Os09g0265450 9637.m00672 - - 3e+0 At3g18570 glycine-rich protein / oleosin C.G. S.X.
0.04 3e-9 65 Os02g0249700 AK106350.1 - Cyclin-like F-box domain containing protein 3e+0 At2g34310 unknown protein C.G. S.X.
0.03 1e-11 73 Os07g0115200 AK111404.1 - Conserved hypothetical protein 3e+0 At3g57500 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e+0 36 Arabidopsis thaliana At5g05580 830441 FAD8 (FATTY ACID DESATURASE 8) Encodes a temperature sensitive plastidic fatty acid desaturase. - - - C.G. S.X.
0.01 4e-1 38 Glycine max HgAffx.22276.1.S1_at CB281753 - - 3e+0 At3g20570 plastocyanin-like domain-containing protein C.G. S.X.
0.04 6e-7 56 Hordeum vulgare Contig19758_at Contig19758 - - 2e-1 At1g14345 oxidoreductase C.G. S.X.
0.01 2e+0 36 Populus trichocarpa PtpAffx.225559.1.S1_x_at pmrna44989 hypothetical protein - 5e-5 At1g16260 protein kinase family protein C.G. S.X.
0.02 1e-6 56 Triticum aestivum TaAffx.12685.1.S1_at BJ244725 - - 4e+0 At4g36900 RAP2.10 (related to AP2 10) C.G. S.X.
0.01 1e+0 34 Vitis vinifera 1613236_at AY427154.1 - - 1e+0 At5g07110 PRA1.B6 (PRENYLATED RAB ACCEPTOR 1.B6) C.G. S.X.
0.01 5e-1 36 Zea mays Zm.14948.1.A1_at CO523021 hypothetical protein LOC100277070 - 6e+0 At3g55250 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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