CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0383700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.60 79.7 Os01g0383700 NM_193939.1 - Peptidase S9A, prolyl oligopeptidase, N-terminalbeta-propeller domain containing protein 4e-6 At4g03020 transducin family protein / WD-40 repeat family protein S.X. H.G.
0.44 58.1 Os03g0784500 AK108472.1 - Hypothetical protein 1e-1 At5g53310 myosin heavy chain-related S.X. H.G.
0.21 17.9 Os05g0495300 AK120489.1 - - 2e-1 At1g48380 RHL1 (ROOT HAIRLESS 1) S.X. H.G.
0.21 17.9 Os09g0413600 AK107000.1 - Rho GTPase activation protein domain containingprotein 1e+0 At1g30260 - S.X. H.G.
0.21 17.9 Os03g0128100 AK105008.2 - Glycosyl transferase, family 48 protein 3e-35 At5g13000 ATGSL12 (glucan synthase-like 12) S.X. H.G.
0.08 4.2 Os01g0919600 AK066408.1 - Conserved hypothetical protein 7e-2 At1g24570 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
18.2 98.9 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
10.2 98.0 GSM154947 Leaf_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
9.3 97.9 GSM154945 Leaf_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
9.0 97.8 GSM154951 Leaf_DMSO-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
8.8 97.8 GSM154946 Leaf_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
8.3 97.7 GSM154953 Leaf_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
7.9 97.6 GSM154952 Leaf_DMSO-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
7.3 97.5 GSM357122 14-day-old seedling, rep 1 GSE14275 Expression data for heat shock in rice seedlings
6.9 97.3 GSM278847 WuYun3-non-infected, biological rep1 GSE11025 Comparative transcriptional profiling of two contrasting rice genotypes in response to rice stripe virus infection
6.2 97.1 GSM357134 14-day-old seedling, rep 3 GSE14275 Expression data for heat shock in rice seedlings
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 1e-47 192 Os05g0144100 AK069280.1 - - 6e-10 At4g03020 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.14 6e-175 617 Os07g0428400 9635.m02360 - - 6e-1 At3g17890 unknown protein C.G. S.X.
0.06 3e-5 52 Os05g0407200 AK072186.1 - WD40-like domain containing protein 8e-20 At4g03020 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.06 2e-4 48 Os01g0960400 AK111991.1 - Protein kinase domain containing protein 5e-9 At1g06840 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.06 2e-4 48 Os06g0361500 AK100549.1 - Conserved hypothetical protein 1e-2 At3g08580 AAC1 (ADP/ATP CARRIER 1) C.G. S.X.
0.03 3e-10 69 Os08g0219100 AK106996.1 - Conserved hypothetical protein 5e+0 Atmg01210 - C.G. S.X.
0.01 3e-2 42 Os04g0683800 AK073897.1 - Phosphoribosylanthranilate transferase-likeprotein 9e-15 At3g57880 C2 domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 4e-6 54 Arabidopsis thaliana At4g03020 828111 transducin family protein / WD-40 repeat family protein F:nucleotide binding;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFOBPA - - - C.G. S.X.
0.13 2e-8 61 Glycine max Gma.8837.2.S1_at AI736453 - - 1e-26 At4g03020 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.02 2e+0 34 Hordeum vulgare HS08H05u_at HS08H05u - - 2e-4 At5g60460 sec61beta family protein C.G. S.X.
0.07 6e-12 73 Populus trichocarpa PtpAffx.75213.1.S1_at CV280554 hypothetical protein - 5e-11 At4g03020 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.05 4e-3 44 Triticum aestivum TaAffx.88685.1.S1_at CA745103 - - 5e-9 At4g03020 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.07 8e-8 57 Vitis vinifera 1622539_at CF511109 hypothetical protein LOC100244218 - 7e-19 At4g03020 transducin family protein / WD-40 repeat family protein C.G. S.X.
0.03 7e-3 42 Zea mays Zm.13649.1.A1_at CD998903 LEC14B - 3e-8 At4g03020 transducin family protein / WD-40 repeat family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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