CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0374400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0374400 NM_193862.1 - Conserved hypothetical protein 4e+0 At4g33040 glutaredoxin family protein S.X. H.G.
0.67 87.2 Os07g0642000 NM_188821.1 - - 9e-4 At1g18680 HNH endonuclease domain-containing protein S.X. H.G.
0.55 73.7 Os08g0334566 9636.m02419 - - 4e+0 At5g05230 ubiquitin-protein ligase S.X. H.G.
0.55 73.7 Os02g0255400 NM_196472.1 - RNA-directed DNA polymerase (Reversetranscriptase) domain containing protein 1e-3 At2g39480 PGP6 (P-GLYCOPROTEIN 6) S.X. H.G.
0.38 46.9 Os01g0758800 AU082216 - Conserved hypothetical protein 1e+0 At3g26420 ATRZ-1A S.X. H.G.
0.36 44.0 Os02g0322600 9630.m02084 - - 4e-2 At4g35860 ATGB2 (GTP-BINDING 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
70.9 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
33.6 99.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.9 99.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.2 99.3 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.1 99.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.1 99.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.0 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.9 99.3 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.5 99.1 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.3 99.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.16 4e-26 121 Os03g0113200 AK109767.1 - Cyclin-like F-box domain containing protein 8e-1 At4g21690 GA3OX3 (GIBBERELLIN 3-OXIDASE 3) C.G. S.X.
0.12 1e-19 99 Os01g0939200 AK110814.1 - Conserved hypothetical protein 3e+0 At4g16210 ECHIA (ENOYL-COA HYDRATASE/ISOMERASE A) C.G. S.X.
0.07 2e-9 65 Os04g0486300 AK063256.1 - Conserved hypothetical protein 8e-1 At3g61260 DNA-binding family protein / remorin family protein C.G. S.X.
0.07 2e-9 65 Os08g0344900 9636.m02723 - - 4e+0 At4g10160 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.07 2e-9 65 Os08g0363000 AK106532.1 - Conserved hypothetical protein 2e-1 At2g23830 vesicle-associated membrane protein, putative / VAMP, putative C.G. S.X.
0.02 1e-1 38 Os02g0137200 AK060290.1 - 50S ribosomal protein L3-1, chloroplast precursor 2e-6 At2g43030 ribosomal protein L3 family protein C.G. S.X.
0.02 1e-1 38 Os02g0526000 AK071231.1 - Conserved hypothetical protein 2e-4 At5g47900 unknown protein C.G. S.X.
0.02 1e-1 38 Os05g0452800 AK102413.1 - Zn-finger, RING domain containing protein 9e-7 At5g05830 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 6e-1 36 Os06g0548800 AK072611.1 - Nectarin 5 (Fragment) 2e-2 At1g26410 FAD-binding domain-containing protein C.G. S.X.
0.01 6e-1 36 Os05g0590100 AK072823.1 - Ubiquitin domain containing protein 8e-5 At2g46500 phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e+0 32 Arabidopsis thaliana At5g11200 830990 DEAD/DEAH box helicase, putative F:helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding;P:biological_process unknown;C:cell wall;BOMFPAV - - - C.G. S.X.
0.04 6e+0 32 Glycine max PsAffx.psMC006xE18f_s_at PsAffx.psMC006xE18f - - 6e-1 At3g43150 unknown protein C.G. S.X.
0.03 2e+0 32 Hordeum vulgare HVSMEn0012L05r2_at HVSMEn0012L05r2 - - 7e-2 At5g08520 myb family transcription factor C.G. S.X.
0.04 4e-1 36 Populus trichocarpa PtpAffx.30793.1.A1_at CV261095 hypothetical protein - 7e-1 At3g42560 unknown protein C.G. S.X.
0.04 1e+0 34 Triticum aestivum TaAffx.58753.2.S1_at CA619222 - - 1e+0 At5g15640 mitochondrial substrate carrier family protein C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1610512_at CD798938 hypothetical protein LOC100241828 - 6e-2 At1g75250 ATRL6 (ARABIDOPSIS RAD-LIKE 6) C.G. S.X.
0.03 1e-1 36 Zea mays Zm.15027.1.A1_at BM268637 catalytic/ hydrolase - 7e+0 At3g62040 catalytic/ hydrolase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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