CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0355200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0355200 NM_193968.1 - - 4e+0 At3g14480 glycine/proline-rich protein S.X. H.G.
0.67 87.2 Os11g0138800 9639.m00346 - - 2e-1 At3g16420 PBP1 (PYK10-BINDING PROTEIN 1) S.X. H.G.
0.67 87.2 Os02g0517000 9630.m02995 - - 3e-2 At1g13690 ATE1 S.X. H.G.
0.63 82.7 Os08g0247950 9636.m01500 - - 7e-1 At1g50800 unknown protein S.X. H.G.
0.57 77.0 Os12g0520000 9640.m03243 - - 3e-1 At2g16890 UDP-glucoronosyl/UDP-glucosyl transferase family protein S.X. H.G.
0.35 41.7 Os12g0505200 9640.m03094 - - 3e-1 At1g18680 HNH endonuclease domain-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
384.9 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.2 99.6 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
1.4 88.7 GSM159172 Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
1.4 88.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.4 88.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.3 87.8 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.2 86.9 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.1 85.9 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.9 83.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.9 83.3 GSM281585 Rice Zhonghua11, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 2e-31 137 Os04g0341800 9632.m02580 - Terpene synthase-like domain containing protein 2e-2 At4g01720 WRKY47 C.G. S.X.
0.08 2e-19 97 Os11g0257800 CB629785 - Conserved hypothetical protein 6e+0 At5g13250 unknown protein C.G. S.X.
0.07 1e-63 244 Os11g0269700 AK071998.1 - Conserved hypothetical protein 2e+0 At2g47670 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.07 9e-40 165 Os06g0280900 AK061934.1 - Conserved hypothetical protein 2e+0 At1g19960 - C.G. S.X.
0.04 1e-14 81 Os12g0186600 AK104628.1 - Conserved hypothetical protein 5e-2 At5g66300 NAC105 (NAC DOMAIN CONTAINING PROTEIN 105) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e+0 32 Arabidopsis thaliana At3g14480 820671 glycine/proline-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPBOFVA - - - C.G. S.X.
0.04 6e+0 32 Glycine max PsAffx.C11000050_s_at PsAffx.C11000050 - - 8e-1 At4g38740 ROC1 (ROTAMASE CYP 1) C.G. S.X.
0.03 8e+0 30 Hordeum vulgare rbags25g01_at rbags25g01 - - 1e+0 At5g22880 HTB2 C.G. S.X.
0.04 6e+0 32 Populus trichocarpa PtpAffx.222958.1.S1_x_at pmrna40696 hypothetical protein - 1e+0 At5g45980 WOX8 (WUSCHEL RELATED HOMEOBOX 8) C.G. S.X.
0.04 5e+0 32 Triticum aestivum TaAffx.110348.1.S1_at CA660089 - - 1e+1 At5g64810 WRKY51 C.G. S.X.
0.03 3e-1 34 Vitis vinifera 1612824_at CD712593 - - 3e+0 At3g28230 - C.G. S.X.
0.03 7e+0 30 Zea mays Zm.4986.3.A1_at AI770643 hypothetical protein LOC100279549 - 7e-26 At5g15490 UDP-glucose 6-dehydrogenase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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