CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0327500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.93 99.2 Os01g0327500 AK107756.1 - Conserved hypothetical protein 1e+0 At5g66170 - S.X. H.G.
0.31 34.5 Os03g0138500 AK102410.1 - Hypothetical protein 5e-2 At3g10040 transcription factor S.X. H.G.
0.29 31.1 Os06g0115700 AK073098.1 - Conserved hypothetical protein 1e-1 At1g12760 protein binding / ubiquitin-protein ligase/ zinc ion binding S.X. H.G.
0.27 27.5 Os03g0727000 AK107637.1 - Homeobox 20 8e-16 At4g08150 KNAT1 (KNOTTED-LIKE FROM ARABIDOPSIS THALIANA) S.X. H.G.
0.15 10.3 Os10g0146200 AK109913.1 - Thaumatin-like protein 1e-5 At1g20030 pathogenesis-related thaumatin family protein S.X. H.G.
0.09 4.9 Os11g0484300 AK121422.1 - MCM protein 2 family protein 5e-87 At1g44900 ATP binding / DNA binding / DNA-dependent ATPase S.X. H.G.
0.09 4.9 Os11g0657000 AK103782.1 - Galactose oxidase, central domain containingprotein 3e-5 At5g18590 kelch repeat-containing protein S.X. H.G.
0.08 4.2 Os01g0779800 AK119965.1 - Hypothetical protein 4e-2 At4g28180 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
45.2 99.9 GSM409422 Nipponbare_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
42.6 99.9 GSM409428 Nipponbare_young panicle 2cm, biological rep4 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
41.1 99.9 GSM409421 Nipponbare_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
38.3 99.8 GSM409429 Nipponbare_young panicle 2cm, biological rep5 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
35.1 99.8 GSM409427 Nipponbare_young panicle 2cm, biological rep3 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
14.3 98.6 GSM99877 TCHW P19_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
14.0 98.5 GSM99879 TCHW P21_ir29 control, biological rep3 GSE4438 Expression data from rice under salinity stress
13.5 98.5 GSM99878 TCHW P20_ir29 control, biological rep2 GSE4438 Expression data from rice under salinity stress
11.7 98.2 GSM99858 TCHW P1_m103 control, biological rep1 GSE4438 Expression data from rice under salinity stress
11.3 98.2 GSM99860 TCHW P3_m103 control, biological rep3 GSE4438 Expression data from rice under salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-3 44 Os10g0407200 AK101309.1 - Protein of unknown function DUF962 family protein 8e-3 At2g39320 OTU-like cysteine protease family protein C.G. S.X.
0.03 4e-2 40 Os04g0502000 9632.m04042 - - 6e-3 At1g68870 unknown protein C.G. S.X.
0.02 1e-2 42 Os11g0582400 AF516927.1 - Hypothetical protein 2e-1 At5g25020 unknown protein C.G. S.X.
0.02 4e-2 40 Os05g0153300 9633.m00532 - Lipase, class 3 family protein 3e+0 At2g20740 - C.G. S.X.
0.02 4e-2 40 Os09g0419200 AK067949.1 - Cinnamoyl-CoA reductase 1e-2 At5g19440 cinnamyl-alcohol dehydrogenase, putative (CAD) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At5g66170 836749 - F:molecular_function unknown;P:aging;C:cellular_component unknown;PBOA - - - C.G. S.X.
0.04 1e-1 38 Glycine max GmaAffx.20340.1.A1_at CD396764 - - 7e-1 At5g48200 unknown protein C.G. S.X.
0.04 4e-2 38 Hordeum vulgare Contig4633_at Contig4633 - - 2e+0 At5g42635 glycine-rich protein C.G. S.X.
0.03 5e-1 36 Populus trichocarpa PtpAffx.216070.1.S1_at pmrna30631 - - 2e-1 At5g38610 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.10 2e-8 59 Triticum aestivum Ta.4224.1.S1_at BQ170966 - - 9e-2 At1g44160 DNAJ chaperone C-terminal domain-containing protein C.G. S.X.
0.03 6e+0 30 Vitis vinifera 1615335_s_at CF205989.1 hypothetical protein LOC100241327 - 2e+0 At4g15760 MO1 (MONOOXYGENASE 1) C.G. S.X.
0.03 1e-1 36 Zea mays Zm.15977.1.A1_at AY108613.1 - - 5e+0 At5g19050 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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