CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0282400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0282400 NM_187704.1 - - 2e+1 At5g25280 serine-rich protein-related S.X. H.G.
0.80 94.6 Os07g0639200 9635.m04476 - - 3e+0 At3g14840 leucine-rich repeat family protein / protein kinase family protein S.X. H.G.
0.73 91.1 Os01g0541900 CB622869 - Protein kinase domain containing protein 1e+0 At3g28250 glycosyl hydrolase family protein 17 S.X. H.G.
0.67 87.2 Os09g0335300 9637.m01393 - - 3e-2 At5g67490 unknown protein S.X. H.G.
0.36 44.0 Os01g0900400 9629.m06700 - Lipase, class 3 family protein 6e-1 At3g27270 - S.X. H.G.
0.32 36.3 Os06g0286600 9634.m01776 - - 8e+0 At5g44060 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
289.6 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
14.0 98.5 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
8.6 97.8 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
4.9 96.5 GSM431936 Shoot- -Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
4.9 96.5 GSM281583 Rice Zhonghua11, biological rep1 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
3.2 94.9 GSM281586 Rice mutant dst, biological rep1 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
3.0 94.6 GSM281587 Rice mutant dst, biological rep2 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
3.0 94.6 GSM281588 Rice mutant dst, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
2.7 94.1 GSM261999 IAC165, 2 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
2.7 94.1 GSM262008 IAC165, 11 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.21 3e-9 63 Os01g0634700 9629.m04279 - - 3e-1 At5g60850 OBP4 C.G. S.X.
0.07 2e-7 57 Os03g0612600 AK071403.1 - Ribosomal protein L25-like domain containingprotein 2e+0 At1g07950 surfeit locus protein 5 family protein / SURF5 family protein C.G. S.X.
0.04 2e-4 48 Os02g0782300 AK067047.1 - Conserved hypothetical protein 3e+0 At4g30370 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+1 30 Arabidopsis thaliana At5g25280 832600 serine-rich protein-related F:molecular_function unknown;P:biological_process unknown;C:unknown;OMPFB - - - C.G. S.X.
0.04 4e-1 36 Glycine max PsAffx.psML011xH08f_at PsAffx.psML011xH08f - - 1e+1 At1g56220 dormancy/auxin associated family protein C.G. S.X.
0.06 6e-4 44 Hordeum vulgare Contig11265_at Contig11265 - - 2e+0 At1g02510 TPK4 C.G. S.X.
0.04 4e-1 36 Populus trichocarpa PtpAffx.215540.1.S1_at pmrna29796 hypothetical protein - 4e+0 At4g17310 unknown protein C.G. S.X.
0.04 3e-1 36 Triticum aestivum TaAffx.86874.1.S1_at CA599519 - - 1e+0 At1g55160 unknown protein C.G. S.X.
0.03 6e+0 30 Vitis vinifera 1617405_at BQ798422 - - 3e-1 At2g42390 protein kinase C substrate, heavy chain-related C.G. S.X.
0.04 1e-1 36 Zea mays ZmAffx.994.1.A1_at AI855283 - - 3e+0 At5g11360 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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