Gene omics information

Query gene ID Os01g0262500
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5978.0Os01g0262500AK071545.1-TRAM, LAG1 and CLN8 homology domain containingprotein4e-1At3g51110crooked neck protein, putative / cell cycle protein, putativeS.X.H.G.
0.8395.8Os08g0445000AK106866.1-Zn-finger, RING domain containing protein1e-3At5g57750zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
0.5068.0Os01g0857600CB965854-Conserved hypothetical protein8e-2At4g17480palmitoyl protein thioesterase family proteinS.X.H.G.
0.3541.7Os05g0227600AY224438.1-Conserved hypothetical protein3e-6At2g24060translation initiation factor 3 (IF-3) family proteinS.X.H.G.
0.2931.1Os02g0158300AU162361-KpsF/GutQ family protein5e-13At3g54690sugar isomerase (SIS) domain-containing protein / CBS domain-containing proteinS.X.H.G.
0.2219.4Os06g0531900AK067909.1-Lipolytic enzyme, G-D-S-L family protein8e-1At3g16100ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
12.398.3GSM99860TCHW P3_m103 control, biological rep3GSE4438Expression data from rice under salinity stress
10.298.0GSM99858TCHW P1_m103 control, biological rep1GSE4438Expression data from rice under salinity stress
9.197.9GSM67062IR29 salt stressed replicate 3GSE3053Rice salt expression
7.697.5GSM99864TCHW P7_ir29 control, biological rep1GSE4438Expression data from rice under salinity stress
7.597.5GSM67061IR29 salt stressed replicate 2GSE3053Rice salt expression
6.397.2GSM99859TCHW P2_m103 control, biological rep2GSE4438Expression data from rice under salinity stress
6.397.2GSM99870TCHW P13_agami control, biological rep1GSE4438Expression data from rice under salinity stress
6.297.1GSM281588Rice mutant dst, biological rep3GSE11175Comparison of transcriptome profile between wild-type and dst mutant plants
6.097.0GSM281586Rice mutant dst, biological rep1GSE11175Comparison of transcriptome profile between wild-type and dst mutant plants
5.997.0GSM281585Rice Zhonghua11, biological rep3GSE11175Comparison of transcriptome profile between wild-type and dst mutant plants
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-240Os01g0247900AK109164.1-AWPM-19-like family protein1e-1At1g29520AWPM-19-like membrane family proteinC.G.S.X.
0.021e-242Os04g0688100U95217.1-Anionic peroxidase precursor1e-2At5g40150peroxidase, putativeC.G.S.X.
0.022e-138Os01g0327000NM_183815.1-Conserved hypothetical protein7e-7At1g14540anionic peroxidase, putativeC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.024e-136Arabidopsis thalianaAt3g51110824275crooked neck protein, putative / cell cycle protein, putativeF:binding;P:RNA processing;C:intracellular;MFOPBA---C.G.S.X.
0.026e-136Glycine maxGmaAffx.92417.1.S1_atCF808142--1e+0At5g26848unknown proteinC.G.S.X.
0.498e-103373Hordeum vulgareContig16313_atContig16313--1e-1At1g35170-C.G.S.X.
0.031e-242Populus trichocarpaPtpAffx.59670.1.A1_atCV273311hypothetical protein-9e-2At1g09460glucan endo-1,3-beta-glucosidase-relatedC.G.S.X.
0.493e-107389Triticum aestivumTa.4830.1.S1_a_atBJ272520--1e-1At1g35170-C.G.S.X.
0.035e-134Vitis vinifera1611424_atCF209697--9e-1At2g26680-C.G.S.X.
0.263e-34145Zea maysZm.6741.1.A1_atAI396113hypothetical protein LOC100275507-6e+0At5g60330unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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