CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0247500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.92 99.1 Os01g0247500 AK065614.1 - Protein kinase domain containing protein 8e-4 At1g49730 protein kinase family protein S.X. H.G.
0.40 51.1 Os04g0669600 AK110767.1 - Phospholipase/Carboxylesterase family protein 2e+0 At4g22300 SOBER1 (SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1) S.X. H.G.
0.34 40.0 Os01g0733000 AK109720.1 - Hypothetical protein 2e+0 At4g29110 unknown protein S.X. H.G.
0.24 22.4 Os01g0379400 AK110939.1 - F-box protein 3e-1 At5g48270 unknown protein S.X. H.G.
0.23 21.2 Os09g0425700 AK066836.1 - N-myristoyltransferase-like protein 2 1e+0 At4g00180 YAB3 (YABBY3) S.X. H.G.
0.23 21.2 Os02g0161000 AK111660.1 - Serine/threonine protein kinase-like protein 2e-17 At5g07070 CIPK2 (CBL-INTERACTING PROTEIN KINASE 2) S.X. H.G.
0.22 19.4 Os02g0582100 CB657553 - Conserved hypothetical protein 4e-1 At5g52360 ADF10 (ACTIN DEPOLYMERIZING FACTOR 10) S.X. H.G.
0.22 19.4 Os05g0208900 AK111244.1 - Conserved hypothetical protein 4e-1 At5g45680 FK506-binding protein 1 (FKBP13) S.X. H.G.
0.21 17.9 Os01g0681400 AK101033.1 - Autophagy protein Apg6 family protein 5e-6 At3g61710 autophagy protein Apg6 family S.X. H.G.
0.21 17.9 Os06g0686400 AK063215.1 - Plant lipid transfer protein/Par allergen familyprotein 9e-1 At4g27810 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
20.2 99.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.4 99.0 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.0 99.0 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.9 98.9 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.8 98.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.1 98.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.9 98.6 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.2 98.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.7 98.4 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.4 98.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 3e-14 81 Os05g0398800 AK106842.1 - Protein kinase domain containing protein 1e+0 At5g45770 AtRLP55 (Receptor Like Protein 55) C.G. S.X.
0.08 7e-15 83 Os02g0194400 AK110011.1 - Protein kinase domain containing protein 1e-2 At1g78980 SRF5 (STRUBBELIG-RECEPTOR FAMILY 5) C.G. S.X.
0.07 8e-24 113 Os03g0145000 9631.m00434 - Protein kinase domain containing protein 1e-4 At4g28650 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.05 2e-21 105 Os02g0111800 AK111191.1 - Protein kinase domain containing protein 7e-3 At1g08590 CLAVATA1 receptor kinase (CLV1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e-4 46 Arabidopsis thaliana At1g49730 841396 protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA - - - C.G. S.X.
0.03 5e-3 44 Glycine max GmaAffx.92535.1.S1_at CF808260 - - 6e-2 At1g26970 protein kinase, putative C.G. S.X.
0.12 3e-26 119 Hordeum vulgare Contig22441_at Contig22441 - - 1e-1 At1g49730 protein kinase family protein C.G. S.X.
0.04 7e-5 50 Populus trichocarpa PtpAffx.201349.1.S1_at pmrna2678 hypothetical protein - 1e-41 At1g78530 protein kinase family protein C.G. S.X.
0.07 2e-11 71 Triticum aestivum Ta.12765.1.A1_at CD373954 - - 9e-2 At3g17840 RLK902 C.G. S.X.
0.03 2e-7 56 Vitis vinifera 1616189_at CF511570 hypothetical protein LOC100260741 - 6e-18 At1g75820 CLV1 (CLAVATA 1) C.G. S.X.
0.10 6e-12 71 Zea mays Zm.1140.1.S1_at BM073428 hypothetical protein LOC100279272 - 4e-14 At3g49670 BAM2 (BARELY ANY MERISTEM 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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