CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0210100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os01g0210100 NM_197507.1 - - 2e+0 At5g38760 unknown protein S.X. H.G.
0.50 68.0 Os11g0280500 AK071642.1 - Hypothetical protein 2e-1 At4g26840 SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) S.X. H.G.
0.44 58.1 Os03g0744200 AK063816.1 - Hypothetical protein 1e-1 At2g41840 40S ribosomal protein S2 (RPS2C) S.X. H.G.
0.43 55.4 Os11g0307600 AK070683.1 - Conserved hypothetical protein 2e-2 At2g44390 DC1 domain-containing protein S.X. H.G.
0.40 51.1 Os11g0258900 AK102638.1 - Conserved hypothetical protein 9e-1 At5g38760 unknown protein S.X. H.G.
0.29 31.1 Os05g0580550 9633.m04745 - - 2e+0 At5g35680 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
24.0 99.4 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.2 99.3 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.7 99.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.6 99.3 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.4 99.2 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.3 99.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
19.1 99.0 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.1 98.9 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.8 98.8 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.5 98.7 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.63 3e-170 599 Os07g0543700 AK105710.1 - Conserved hypothetical protein 6e-1 At5g38760 unknown protein C.G. S.X.
0.40 4e-102 373 Os08g0561800 AK119834.1 - Conserved hypothetical protein 2e-1 At1g11850 unknown protein C.G. S.X.
0.32 2e-94 347 Os05g0429100 AK100059.1 - Conserved hypothetical protein 1e-2 At2g17110 unknown protein C.G. S.X.
0.30 1e-34 147 Os10g0544000 9640.m02312 - - 3e+0 At5g19315 - C.G. S.X.
0.29 1e-105 385 Os11g0686100 AK105797.1 - Conserved hypothetical protein 3e+0 At5g10030 TGA4 (TGACG MOTIF-BINDING FACTOR 4) C.G. S.X.
0.16 3e-112 406 Os01g0795200 NM_190892.1 - Subtilase 8e-2 At4g10520 subtilase family protein C.G. S.X.
0.15 1e-25 117 Os11g0258900 AK102638.1 - Conserved hypothetical protein 9e-1 At5g38760 unknown protein C.G. S.X.
0.15 3e-23 109 Os06g0118600 AK071942.1 - Conserved hypothetical protein 8e-4 At5g14850 mannosyltransferase, putative C.G. S.X.
0.14 3e-96 353 Os08g0293100 AK071000.1 - Conserved hypothetical protein 4e-1 At4g17585 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At5g38760 833867 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PF - - - C.G. S.X.
0.03 2e-1 38 Glycine max PsAffx.C166000022_at PsAffx.C166000022 - - 9e-1 At1g80620 ribosomal protein S15 family protein C.G. S.X.
0.03 3e-1 36 Hordeum vulgare Contig4641_s_at Contig4641 - - 2e-3 At4g00810 60S acidic ribosomal protein P1 (RPP1B) C.G. S.X.
0.03 3e+0 34 Populus trichocarpa PtpAffx.29198.2.S1_a_at CV245287 hypothetical protein - 1e-16 At4g36420 ribosomal protein L12 family protein C.G. S.X.
0.03 1e-1 38 Triticum aestivum Ta.30765.2.S1_x_at CA619268 - - 1e+0 At5g06660 unknown protein C.G. S.X.
0.03 2e-1 36 Vitis vinifera 1611749_at BQ797297 hypothetical protein LOC100248599 - 5e-1 At3g22620 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein C.G. S.X.
0.02 6e-2 38 Zea mays Zm.2907.1.A1_at AW091196 - - 2e+0 At3g48680 GAMMA CAL2 (GAMMA CARBONIC ANHYDRASE-LIKE 2) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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