CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os01g0201100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.79 93.6 Os01g0201100 C98975 - Glycosyl transferase, family 14 protein 1e+1 Atmg00110 - S.X. H.G.
0.79 93.6 Os03g0108500 AK108704.1 - Sterol desaturase family protein 2e-4 At4g22756 SMO1-2 (STEROL C4-METHYL OXIDASE 1-2) S.X. H.G.
0.77 93.1 Os01g0909400 AK068178.1 - Plant protein of unknown function DUF868 familyprotein 1e-5 At1g06160 ORA59 (OCTADECANOID-RESPONSIVE ARABIDOPSIS AP2/ERF 59) S.X. H.G.
0.74 91.4 Os08g0140300 AK069031.1 - Aromatic-L-amino-acid decarboxylase family protein 1e+1 At5g18060 auxin-responsive protein, putative S.X. H.G.
0.73 91.1 Os11g0285000 AK070534.1 - Beta-amyrin synthase 3e-17 At2g07050 CAS1 (cycloartenol synthase 1) S.X. H.G.
0.73 91.1 Os02g0519100 AK119325.1 - K+ potassium transporter family protein 9e-5 At4g13420 HAK5 (HIGH AFFINITY K+ TRANSPORTER 5) S.X. H.G.
0.73 91.1 Os02g0103100 AK071040.1 - Conserved hypothetical protein 3e-1 At5g62500 ATEB1B (END BINDING PROTEIN 1B) S.X. H.G.
0.72 89.8 Os04g0557800 AB021079.1 - Ra 5e+0 At5g41315 GL3 (GLABROUS 3) S.X. H.G.
0.71 89.6 Os04g0182300 9632.m00908 - Peptidase S8 and S53, subtilisin, kexin, sedolisindomain containing protein 5e+0 At1g01900 SBTI1.1 S.X. H.G.
0.70 88.4 Os08g0544400 AK107688.1 - ABC transporter related domain containing protein 2e-10 At2g29940 PDR3 (PLEIOTROPIC DRUG RESISTANCE 3) S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
69.6 99.9 GSM195220 stigma 3, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
66.0 99.9 GSM195219 stigma 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
63.8 99.9 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
49.9 99.9 GSM195218 stigma 1, biological rep1 GSE7951 Genome-wide gene expression profiling of rice stigma
13.3 98.4 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
7.4 97.5 GSM159210 Seed (S2, 3 - 4 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
7.1 97.4 GSM159211 Seed (S2, 3 - 4 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
6.5 97.2 GSM159208 Seed (S1, 0 - 2 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
6.4 97.2 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
6.4 97.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 2e-27 125 Os03g0692000 9631.m04726 - Glycosyl transferase, family 14 protein 7e-4 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.12 2e-12 75 Os12g0639700 AK069880.1 - - 5e-8 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.09 8e-18 93 Os10g0437000 CB657474 - Glycosyl transferase, family 14 protein 1e-5 At3g03690 UNE7 (unfertilized embryo sac 7) C.G. S.X.
0.07 3e-5 52 Os08g0143500 AK061094.1 - Glycosyl transferase, family 14 protein 3e-2 At5g15050 glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein C.G. S.X.
0.03 1e-1 38 Os06g0129100 NM_185488.1 - Short-chain dehydrogenase/reductase SDR familyprotein 1e-7 At1g64590 short-chain dehydrogenase/reductase (SDR) family protein C.G. S.X.
0.02 1e-1 38 Os06g0281800 AK064437.1 - BURP domain containing protein 1e-2 At5g25610 RD22 C.G. S.X.
0.02 1e-1 38 Os11g0175700 AB071804.1 - The start codon is not identified. 6e-8 At1g35560 TCP family transcription factor, putative C.G. S.X.
0.02 4e-1 36 Os11g0543900 AK107059.1 - - 2e-1 At2g28570 unknown protein C.G. S.X.
0.01 4e-1 36 Os04g0360500 9632.m02750 - Plant-specific FAD-dependent oxidoreductase familyprotein 7e-5 At2g46750 FAD-binding domain-containing protein C.G. S.X.
0.01 4e-1 36 Os05g0512000 AK102433.1 - Zn-finger, RING domain containing protein 2e-6 At4g21070 ATBRCA1 C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+1 30 Arabidopsis thaliana Atmg00110 - - Encodes a mitochondria-encoded cytochrome c biogenesis protein. - - - C.G. S.X.
0.03 5e+0 32 Glycine max GmaAffx.92253.1.S1_at CF807978 - - 1e+0 At5g02120 OHP (ONE HELIX PROTEIN) C.G. S.X.
0.05 6e+0 30 Hordeum vulgare HVSMEn0003C09f_at HVSMEn0003C09f - - 4e-8 At3g10860 ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative C.G. S.X.
0.04 2e+1 30 Populus trichocarpa PtpAffx.8561.1.S1_a_at BU819526 stress-induced hydrophobic peptide - 7e-5 At3g05880 RCI2A (RARE-COLD-INDUCIBLE 2A) C.G. S.X.
0.05 2e-1 36 Triticum aestivum Ta.18666.2.S1_at CA608917 - - 1e+0 At5g52500 unknown protein C.G. S.X.
0.03 1e+1 28 Vitis vinifera 1621327_at CB971488 hypothetical protein LOC100250889 - 1e+0 At1g62990 KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7) C.G. S.X.
0.03 6e+0 30 Zea mays Zm.9162.1.A1_at BM337868 - - 1e+0 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage